RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 HS3ST4Q9Y661 456 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZNF726A6NNF4 738 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 TSTD3H0UI37 97 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 MRPL3P09001 348 aaKnown RBP12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 SOX2P48431 317 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 GRIN2CQ14957 1233 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 CGB2Q6NT52 195 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 CNIH2Q6PI25 160 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 GTF2H4Q92759 462 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC6A7Q99884 636 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 RIMS3Q9UJD0 308 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 WDR45Q9Y484 360 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 KCTD3Q9Y597 815 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 GRXCR2A6NFK2 248 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 CAMLGP49069 296 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 NKX6-1P78426 367 aaPredicted RBP12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 AKR1C8PQ5T2L2 129 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 TMPRSS12Q86WS5 348 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR5H6Q8NGV6 325 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 OTUB2Q96DC9 234 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 FBXL21Q9UKT6 434 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 SPEF2Q9C093 1822 aa12.21□□□□□ -0.45
SYNCRIP-201ENST00000355238 UNC119BA6NIH7 251 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 ALPIP09923 528 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 S1PR1P21453 382 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 DCTP40126 519 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 CASP3P42574 277 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 MTNR1AP48039 350 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 CAPZA1P52907 286 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 PDX1P52945 283 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 MC2RQ01718 297 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 LRRC32Q14392 662 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 CDNFQ49AH0 187 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 FAM69AQ5T7M9 428 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 DHRS1Q96LJ7 313 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 GOSR2O14653 212 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 DNAJB6O75190 326 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 SNAPINO95295 136 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 TFAP2AP05549 437 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 CCKBRP32239 447 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 CSKP41240 450 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 CLDN8P56748 225 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 MLLT1Q03111 559 aaPredicted RBP12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 ILF3Q12906 894 aaKnown RBP eCLIP12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 SLC39A4Q6P5W5 647 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 HFE2Q6ZVN8 426 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 NLGN2Q8NFZ4 835 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR4K1Q8NGD4 311 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 HMX1Q9NP08 348 aaPredicted RBP12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 SERINC1Q9NRX5 453 aa12.21□□□□□ -0.46
SYNCRIP-201ENST00000355238 PYCR1P32322 319 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 SLC6A9P48067 706 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 RABGGTBP53611 331 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 CHRFAM7AQ494W8 412 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 VARS2Q5ST30 1063 aaKnown RBP12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 THAP4Q8WY91 577 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 TBL1XR1Q9BZK7 514 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 SLC6A16Q9GZN6 736 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 ABCC6O95255 1503 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 LOC285095A0A1B0GVY8 99 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 TCRBV3S1A0A5B6 114 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 GXYLT2A0PJZ3 443 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 SGCEO43556 437 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 MITFO75030 526 aaPredicted RBP12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 SPDEFO95238 335 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 Q6ZNX1 250 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 FRS2Q8WU20 508 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 OR51B5Q9H339 312 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 KCNK13Q9HB14 408 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 DNAJC15Q9Y5T4 150 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 PIGBOS1A0A0B4J2F0 54 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 NPIPA5E9PKD4 350 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 POLR1CO15160 346 aaPredicted RBP12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 NFATC1O95644 943 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 GAS6Q14393 721 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 ATAD3CQ5T2N8 411 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 DTX3Q8N9I9 347 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 Q9N2J8 555 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 PADI3Q9ULW8 664 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 NPIPA1Q9UND3 350 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 TRBV2A0A0J9YWF9 115 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 TRIM64A6NGJ6 449 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 TRIM64BA6NI03 449 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 PRKCGP05129 697 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 DGKZQ13574 1117 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 ABRAXAS2Q15018 415 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 ODF4Q2M2E3 257 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 PLEKHS1Q5SXH7 462 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 KCTD18Q6PI47 426 aaPredicted RBP12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 NUS1Q96E22 293 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 ARL5BQ96KC2 179 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 SARDHQ9UL12 918 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 TMEM14AQ9Y6G1 99 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 SORBS2O94875 1100 aaKnown RBP12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 ITGAMP11215 1152 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 FOSL1P15407 271 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 BDKRB1P46663 353 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 ZFP57Q9NU63 452 aa12.2□□□□□ -0.46
SYNCRIP-201ENST00000355238 TMEM248Q9NWD8 314 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms