RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 C19orf47Q8N9M1 422 aaKnown RBP16.26■□□□□ 0.19
VPS13B-201ENST00000355155 OR10G6Q8NH81 332 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 EXOSC8Q96B26 276 aaKnown RBP16.26■□□□□ 0.19
VPS13B-201ENST00000355155 HSH2DQ96JZ2 352 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 PSD2Q9BQI7 771 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 PRM3Q9NNZ6 103 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 SMPD3Q9NY59 655 aaPredicted RBP16.26■□□□□ 0.19
VPS13B-201ENST00000355155 TPST1O60507 370 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 ALOX12P18054 663 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 CSNK2A2P19784 350 aaPredicted RBP16.26■□□□□ 0.19
VPS13B-201ENST00000355155 ALDH9A1P49189 494 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 LIM2P55344 173 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 MERTKQ12866 999 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 BHLHB9Q6PI77 547 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 USP53Q70EK8 1073 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 CLEC4FQ8N1N0 589 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 OR56A1Q8NGH5 318 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 MAFAQ8NHW3 353 aaPredicted RBP16.26■□□□□ 0.19
VPS13B-201ENST00000355155 PNPT1Q8TCS8 783 aaKnown RBP16.26■□□□□ 0.19
VPS13B-201ENST00000355155 LMX1AQ8TE12 382 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 APOBEC4Q8WW27 367 aaKnown RBP16.26■□□□□ 0.19
VPS13B-201ENST00000355155 RERGQ96A58 199 aaPredicted RBP16.26■□□□□ 0.19
VPS13B-201ENST00000355155 BCL2L10Q9HD36 194 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 PDP2Q9P2J9 529 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 THEGQ9P2T0 379 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 ACSL6Q9UKU0 697 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 PSME2Q9UL46 239 aa16.26■□□□□ 0.19
VPS13B-201ENST00000355155 BLACEA4D250 179 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 A8MVJ9 347 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 EI24O14681 340 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 B3GALT2O43825 422 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 FABP3P05413 133 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 CTSKP43235 329 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 CCT3P49368 545 aaKnown RBP16.25■□□□□ 0.19
VPS13B-201ENST00000355155 RUNX2Q13950 521 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 NRF1Q16656 503 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 C6orf52Q5T4I8 152 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 AP1ARQ63HQ0 302 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 TBPL2Q6SJ96 375 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 TCTN2Q96GX1 697 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 MACROD1Q9BQ69 325 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 SERHL2Q9H4I8 314 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 LOC105369274A0A096LPK9 316 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 LOC102723532A0A0G2JNH3 316 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 B4DGG1 531 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 BCAT2O15382 392 aaPredicted RBP16.25■□□□□ 0.19
VPS13B-201ENST00000355155 SUV39H1O43463 412 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 SOX11P35716 441 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 DCTP40126 519 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 BUD31P41223 144 aaPredicted RBP16.25■□□□□ 0.19
VPS13B-201ENST00000355155 PXNP49023 591 aaPredicted RBP16.25■□□□□ 0.19
VPS13B-201ENST00000355155 MAZP56270 477 aaKnown RBP16.25■□□□□ 0.19
VPS13B-201ENST00000355155 OR2T5Q6IEZ7 315 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 REEP3Q6NUK4 255 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 ARMC6Q6NXE6 501 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 TSEN54Q7Z6J9 526 aaKnown RBP16.25■□□□□ 0.19
VPS13B-201ENST00000355155 OR4N4Q8N0Y3 316 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 LGI4Q8N135 537 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 HORMAD2Q8N7B1 307 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 OR2T29Q8NH02 315 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 TAMM41Q96BW9 452 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 FCRL4Q96PJ5 515 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 EPYCQ99645 322 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 ADI1Q9BV57 179 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 ENTPD4Q9Y227 616 aa16.25■□□□□ 0.19
VPS13B-201ENST00000355155 HMGN4O00479 90 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 GALR3O60755 368 aaPredicted RBP16.24■□□□□ 0.19
VPS13B-201ENST00000355155 ANXA11P50995 505 aaKnown RBP16.24■□□□□ 0.19
VPS13B-201ENST00000355155 RAB8AP61006 207 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 C18orf63Q68DL7 685 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 RBM4BQ9BQ04 359 aaKnown RBP16.24■□□□□ 0.19
VPS13B-201ENST00000355155 RBM4Q9BWF3 364 aaKnown RBP16.24■□□□□ 0.19
VPS13B-201ENST00000355155 GIMAP4Q9NUV9 329 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 RAPGEFL1Q9UHV5 662 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 SCOCQ9UIL1 159 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 A0A0J9YVX5 310 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 FITM1A5D6W6 292 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 G3V2T6 193 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 PDLIM1O00151 329 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 SMNDC1O75940 238 aaKnown RBP eCLIP16.24■□□□□ 0.19
VPS13B-201ENST00000355155 NTRK1P04629 796 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 PROS1P07225 676 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 MPIP34949 423 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 LRRC23Q53EV4 343 aaPredicted RBP16.24■□□□□ 0.19
VPS13B-201ENST00000355155 KANSL1Q7Z3B3 1105 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 ZDHHC13Q8IUH4 622 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 ARMC8Q8IUR7 673 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 NFKBIDQ8NI38 313 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 VPS50Q96JG6 964 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 ZNF347Q96SE7 839 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 SNX11Q9Y5W9 270 aa16.24■□□□□ 0.19
VPS13B-201ENST00000355155 A0A0G2JN53 185 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 EMC8O43402 210 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 PDE9AO76083 593 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 FHP07954 510 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 SOAT1P35610 550 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 CAPGP40121 348 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 MAN2A2P49641 1150 aa16.23■□□□□ 0.19
VPS13B-201ENST00000355155 NCBP2P52298 156 aaKnown RBP eCLIP16.23■□□□□ 0.192e-6■■■□□ 17.1
VPS13B-201ENST00000355155 SNRPNP63162 240 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms