RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 AAGABQ6PD74 315 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 RFLNAQ6ZTI6 216 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 LGI4Q8N135 537 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 KRTCAP2Q8N6L1 136 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 FUBP1Q96AE4 644 aaKnown RBP9.27□□□□□ -0.93
GABPA-201ENST00000354828 TBX5Q99593 518 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 ZDHHC5Q9C0B5 715 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 OR51I1Q9H343 314 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 LIPT1Q9Y234 373 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 DOCK1Q14185 1865 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 TMEM221A6NGB7 291 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 EFCAB9A8MZ26 197 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 M0R296 226 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 FAM189A1O60320 539 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 MPZL2O60487 215 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 FOXD2O60548 495 aaPredicted RBP9.27□□□□□ -0.93
GABPA-201ENST00000354828 RAP2AP10114 183 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 THRBP10828 461 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 ZNF84P51523 738 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 HSD11B2P80365 405 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 SLC14A2Q15849 920 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 TMEM52BQ4KMG9 183 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 HMGN2P46Q86SG4 172 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 BBS10Q8TAM1 723 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 TIMMDC1Q9NPL8 285 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 KCMF1Q9P0J7 381 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 RPH3AQ9Y2J0 694 aaPredicted RBP9.27□□□□□ -0.93
GABPA-201ENST00000354828 LRCH1Q9Y2L9 728 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 MYH7BA7E2Y1 1941 aa9.27□□□□□ -0.93
GABPA-201ENST00000354828 ABCB7O75027 752 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 ANXA8P13928 327 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 PSMB5P28074 263 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 CLCN2P51788 898 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 ELF3P78545 371 aaPredicted RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 CCNIQ14094 377 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 SGCAQ16586 387 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 CTC1Q2NKJ3 1217 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 GPR153Q6NV75 609 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 ADAMTSL4Q6UY14 1074 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 PRR22Q8IZ63 422 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 C19orf47Q8N9M1 422 aaKnown RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 PDPRQ8NCN5 879 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 OR7A2PQ8NGA2 310 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 SETD6Q8TBK2 473 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 GAL3ST3Q96A11 431 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 NMD3Q96D46 503 aaKnown RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 RTP4Q96DX8 246 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 CRELD1Q96HD1 420 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 FER1L6-AS2Q96M78 137 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 MEAF6Q9HAF1 191 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 SLC35C2Q9NQQ7 365 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 C5AR2Q9P296 337 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 POFUT2Q9Y2G5 429 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 A0A1W2PP18 115 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 DAPL1A0PJW8 107 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 SRPX2O60687 465 aaPredicted RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 RFPL1O75677 317 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 PRKD3O94806 890 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 NELFEP18615 380 aaKnown RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 GSTM3P21266 225 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 TAS2R38P59533 333 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 DCDP81605 110 aaKnown RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 ZSWIM7Q19AV6 140 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 ALG1LQ6GMV1 187 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 GRHL2Q6ISB3 625 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 TRNP1Q6NT89 227 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 COMMD6Q7Z4G1 85 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 HDDC2Q7Z4H3 204 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 C6orf120Q7Z4R8 191 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 DDHD1Q8NEL9 900 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 OR2L5Q8NG80 312 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 NEIL2Q969S2 332 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 BIRC7Q96CA5 298 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 PDXPQ96GD0 296 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 CENPNQ96H22 339 aaPredicted RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 ADAD1Q96M93 576 aaKnown RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 THSD1Q9NS62 852 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 NLGN3Q9NZ94 848 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 TRBV11-1A0A0K0K1C0 115 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 ZCWPW2A0A1B0GU75 182 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 AK1P00568 194 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 DBTP11182 482 aaKnown RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 ICAM2P13598 275 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 UBE2NP61088 152 aaKnown RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 PTPRRQ15256 657 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 SPATC1Q76KD6 591 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 SVOPLQ8N434 492 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 MEIOBQ8N635 442 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 GPR150Q8NGU9 434 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 VGLL3A8MV65 326 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 INMTO95050 263 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 PENKP01210 267 aaPredicted RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 CAPGP40121 348 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 VASPP50552 380 aaPredicted RBP9.26□□□□□ -0.93
GABPA-201ENST00000354828 GPR18Q14330 331 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 STEAP4Q687X5 459 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 ENPP6Q6UWR7 440 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 ZZZ3Q8IYH5 903 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 OR9A4Q8NGU2 314 aa9.26□□□□□ -0.93
GABPA-201ENST00000354828 ZUFSPQ96AP4 578 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms