RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 NLNQ9BYT8 704 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 FGF20Q9NP95 211 aaPredicted RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 PLSCR3Q9NRY6 295 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 RBFOX1Q9NWB1 397 aaKnown RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 MAP4K5Q9Y4K4 846 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 TRBV4-1A0A0J9YWV2 114 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 A8MV72 311 aaPredicted RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 HEPACAM2A8MVW5 462 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 TFECO14948 347 aaPredicted RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 H1F0P07305 194 aaKnown RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 ACADMP11310 421 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 ALAS2P22557 587 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 AZGP1P25311 298 aaKnown RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 IMPA1P29218 277 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 PKLRP30613 574 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 MAP2K3P46734 347 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 LIM2P55344 173 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 P2RX3P56373 397 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 PLD1Q13393 1074 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 SEC23BQ15437 767 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 TAB1Q15750 504 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 MPEG1Q2M385 716 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 Q5BKY6 102 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 HIST2H2AA3Q6FI13 130 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 ZNF730Q6ZMV8 503 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 CREB3L2Q70SY1 520 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 LAPTM4BQ86VI4 370 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 LRRC56Q8IYG6 542 aaPredicted RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 GPR156Q8NFN8 814 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 TMEM163Q8TC26 289 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 MED8Q96G25 268 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 ZFYVE19Q96K21 471 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 SLC6A18Q96N87 628 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 FYTTD1Q96QD9 318 aaKnown RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 ZIC5Q96T25 663 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 PKP4Q99569 1192 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 C11orf16Q9NQ32 467 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 DNAJC27Q9NZQ0 273 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 LSM7Q9UK45 103 aaKnown RBP10.87□□□□□ -0.67
CAPN9-202ENST00000354537 HS3ST2Q9Y278 367 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 GSTK1Q9Y2Q3 226 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
CAPN9-202ENST00000354537 SLC5A10A0PJK1 596 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 SNTNA6NMZ2 147 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 NPC1O15118 1278 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 ZNF780AO75290 641 aaPredicted RBP10.86□□□□□ -0.67
CAPN9-202ENST00000354537 CYP2A6P11509 494 aaPredicted RBP10.86□□□□□ -0.67
CAPN9-202ENST00000354537 CFL1P23528 166 aaKnown RBP10.86□□□□□ -0.67
CAPN9-202ENST00000354537 GPC1P35052 558 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 DGKGP49619 791 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 STK19P49842 368 aaPredicted RBP10.86□□□□□ -0.67
CAPN9-202ENST00000354537 HNRNPA0Q13151 305 aaKnown RBP10.86□□□□□ -0.67
CAPN9-202ENST00000354537 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.86□□□□□ -0.67
CAPN9-202ENST00000354537 PYDC2Q56P42 97 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 PGBD2Q6P3X8 592 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 QSOX2Q6ZRP7 698 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 RFLNAQ6ZTI6 216 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 ARMCX6Q7L4S7 300 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 NPAS4Q8IUM7 802 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 TRAM1L1Q8N609 369 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 UBE2E3Q969T4 207 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 TMEM159Q96B96 161 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 NEURL3Q96EH8 262 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 FOPNLQ96NB1 174 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 POLR2J3Q9H1A7 115 aaKnown RBP10.86□□□□□ -0.67
CAPN9-202ENST00000354537 DMRT3Q9NQL9 472 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 ZSCAN32Q9NX65 697 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 B4GALT6Q9UBX8 382 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 YIPF1Q9Y548 306 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 ASB4Q9Y574 426 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 OR6C70A6NIJ9 312 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 C5orf58C9J3I9 102 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 SLC30A4O14863 429 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 SLC43A1O75387 559 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 C1GALT1C1LP0DN25 315 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 NR2F6P10588 404 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 PRKAR1AP10644 381 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 WNT4P56705 351 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 EFNB1P98172 346 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 TARDBPQ13148 414 aaKnown RBP eCLIP10.86□□□□□ -0.67
CAPN9-202ENST00000354537 EFR3AQ14156 821 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 SYTL3Q4VX76 610 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 LIPKQ5VXJ0 399 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 TCTN3Q6NUS6 607 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 C22orf39Q6P5X5 142 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 CD200R1LQ6Q8B3 271 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 HTR3DQ70Z44 454 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 OR52I1Q8NGK6 324 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 FGF11Q92914 225 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 MARVELD3Q96A59 401 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 PPP1R3EQ9H7J1 279 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 ING3Q9NXR8 418 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 MRPL39Q9NYK5 338 aaKnown RBP10.86□□□□□ -0.67
CAPN9-202ENST00000354537 LRFN2Q9ULH4 789 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 CARD8Q9Y2G2 431 aa10.86□□□□□ -0.67
CAPN9-202ENST00000354537 SF3B6Q9Y3B4 125 aaKnown RBP10.86□□□□□ -0.67
CAPN9-202ENST00000354537 A0A0B4J293 547 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 PLD2O14939 933 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 OR10H3O60404 316 aa10.85□□□□□ -0.67
CAPN9-202ENST00000354537 KLHL18O94889 574 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms