RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 DTWD1Q8N5C7 304 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 OR2T12Q8NG77 320 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 CLHC1Q8NHS4 586 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 HUS1BQ8NHY5 278 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 TFGQ92734 400 aaPredicted RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 SCARF2Q96GP6 870 aaPredicted RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 REXO5Q96IC2 774 aaKnown RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 TSSK3Q96PN8 268 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 GBP5Q96PP8 586 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 MENTQ9BUN1 341 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 C9orf16Q9BUW7 83 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 RAB11FIP5Q9BXF6 653 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 TRIT1Q9H3H1 467 aaKnown RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 NT5DC2Q9H857 520 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 YY1AP1Q9H869 796 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 GPN2Q9H9Y4 310 aaPredicted RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 WASH6PQ9NQA3 447 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 ATP6V1HQ9UI12 483 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 ZNF639Q9UID6 485 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 ASF1AQ9Y294 204 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 SLC17A4Q9Y2C5 497 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 TMEM98Q9Y2Y6 226 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 PCDHB14Q9Y5E9 798 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 PCYT1BQ9Y5K3 369 aaPredicted RBP7.8□□□□□ -1.16
CD44-205ENST00000352818 AP4B1Q9Y6B7 739 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 AP1M2Q9Y6Q5 423 aa7.8□□□□□ -1.16
CD44-205ENST00000352818 TRPM6Q9BX84 2022 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 UNC13CQ8NB66 2214 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 TNRC6AQ8NDV7 1962 aaKnown RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 ELOVL7A1L3X0 281 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 TMEM200CA6NKL6 621 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 MAGEB17A8MXT2 336 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 RFXANKO14593 260 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 AKAP10O43572 662 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 GMNNO75496 209 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 PRSS23O95084 383 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 SLC35G4P0C7Q5 338 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 MTHFD1P11586 935 aaKnown RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 PCNAP12004 261 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 HNRNPA2B1P22626 353 aaKnown RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 PPIBP23284 216 aaKnown RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 ITGA3P26006 1051 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 AKT2P31751 481 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 IGFALSP35858 605 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 GSTM5P46439 218 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 CHN2P52757 468 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 WNT3P56703 355 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 KIAA1024LP59773 190 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 TXNL4AP83876 142 aaKnown RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 REEP5Q00765 189 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 ZNF763Q0D2J5 394 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 SGCGQ13326 291 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 PDK3Q15120 406 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 PLA2G4EQ3MJ16 856 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 FAM98BQ52LJ0 330 aaKnown RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 PRRT3Q5FWE3 981 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 TMTC4Q5T4D3 741 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 ANXA8L1Q5VT79 327 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 GLYATQ6IB77 296 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 ERICH5Q6P6B1 374 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 TMEM154Q6P9G4 183 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 UGT2A3Q6UWM9 527 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 SERPINA11Q86U17 422 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 IFNEQ86WN2 208 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 FAM129CQ86XR2 697 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 EPHX4Q8IUS5 362 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 METTL4Q8N3J2 472 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 RAB42Q8N4Z0 105 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 C1orf52Q8N6N3 182 aaKnown RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 ARL10Q8N8L6 244 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 Q8N9G6 341 aaPredicted RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 RCBTB1Q8NDN9 531 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 ABHD11Q8NFV4 315 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 OR5AR1Q8NGP9 310 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 GOT1L1Q8NHS2 421 aaPredicted RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.79□□□□□ -1.16
CD44-205ENST00000352818 SMPDL3AQ92484 453 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 COQ8BQ96D53 544 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 MTERF3Q96E29 417 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 ZNF764Q96H86 408 aaPredicted RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 TAAR9Q96RI9 348 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 MTERF1Q99551 399 aaKnown RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 LGR4Q9BXB1 951 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 UGT2B28Q9BY64 529 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 SLC17A9Q9BYT1 436 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 BHLHE41Q9C0J9 482 aaPredicted RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 REXO4Q9GZR2 422 aaKnown RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 RHBGQ9H310 441 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 MAGIXQ9H6Y5 334 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 MVB12BQ9H7P6 319 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 MYNNQ9NPC7 610 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 MBNL1Q9NR56 388 aaKnown RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 SLC23A2Q9UGH3 650 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 CORO2BQ9UQ03 480 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 AURKCQ9UQB9 309 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 SH2B3Q9UQQ2 575 aa7.79□□□□□ -1.16
CD44-205ENST00000352818 WBP11Q9Y2W2 641 aaKnown RBP7.79□□□□□ -1.16
CD44-205ENST00000352818 PRRC2AP48634 2157 aaKnown RBP7.78□□□□□ -1.16
CD44-205ENST00000352818 CUBNO60494 3623 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms