RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 USP17L7P0C7H9 530 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 RAB3BP20337 219 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 NCF4Q15080 339 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 TCTE1Q5JU00 501 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 SLC27A1Q6PCB7 646 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 LAPTM4BQ86VI4 370 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 OR52N1Q8NH53 320 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 MAL2Q969L2 176 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 KLHL5Q96PQ7 755 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 SARS2Q9NP81 518 aaKnown RBP12.64□□□□□ -0.39
IFT88-202ENST00000351808 OR6C2Q9NZP2 312 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 NDRG3Q9UGV2 375 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 PPT2Q9UMR5 302 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 KCNK7Q9Y2U2 307 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 COMMD10Q9Y6G5 202 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 IGKV6-21A0A0C4DH24 114 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 TMEM229AB2RXF0 380 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 J3KTA2 159 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 MPZL2O60487 215 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 NIPSNAP2O75323 286 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 ELK1P19419 428 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 TACR1P25103 407 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 SERTAD2Q14140 314 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 ZSWIM7Q19AV6 140 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 SPIN4Q56A73 249 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 VASNQ6EMK4 673 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 ZER1Q7Z7L7 766 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 NKAPQ8N5F7 415 aaKnown RBP12.64□□□□□ -0.39
IFT88-202ENST00000351808 ATAD1Q8NBU5 361 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 OR4A15Q8NGL6 344 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 OR4C15Q8NGM1 316 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 RFT1Q96AA3 541 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 DPAGT1Q9H3H5 408 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 NLGN3Q9NZ94 848 aa12.64□□□□□ -0.39
IFT88-202ENST00000351808 TSC2P49815 1807 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 ZAR1LA6NP61 321 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 CASC3O15234 703 aaKnown RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 TSPAN3O60637 253 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 EIF3GO75821 320 aaKnown RBP eCLIP12.63□□□□□ -0.39
IFT88-202ENST00000351808 RLN2P04090 185 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 ACAA1P09110 424 aaPredicted RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 CPEP16870 476 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 CRISP1P54107 249 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 FABP5Q01469 135 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 FGL2Q14314 439 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 PTPRNQ16849 979 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 HFEQ30201 348 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 PLK5Q496M5 336 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 HSD17B13Q7Z5P4 300 aaPredicted RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 ZFP41Q8N8Y5 198 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 ZNF527Q8NB42 609 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 FAM46DQ8NEK8 389 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 LPPQ93052 612 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 SLC6A18Q96N87 628 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 TREX2Q9BQ50 279 aaPredicted RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 NKX6-2Q9C056 277 aaPredicted RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 ENAMQ9NRM1 1142 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 MAFFQ9ULX9 164 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 DTX4Q9Y2E6 619 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 GSTK1Q9Y2Q3 226 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 C2orf78A6NCI8 922 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 TRABD2BA6NFA1 517 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 L7N2F9 121 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 EEF1E1O43324 174 aaKnown RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 ULK1O75385 1050 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 OTCP00480 354 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 HIST1H2AGP0C0S8 130 aaPredicted RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 HIST1H2ADP20671 130 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 ITPKAP23677 461 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 ATP5A1P25705 553 aaKnown RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 PTBP1P26599 531 aaKnown RBP eCLIP12.63□□□□□ -0.39
IFT88-202ENST00000351808 GIFP27352 417 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 VIPR1P32241 457 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 MMP12P39900 470 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 GDF5P43026 501 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 OR2G6Q5TZ20 316 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 HIST2H2AA3Q6FI13 130 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 TMEM88Q6PEY1 159 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 UNC5DQ6UXZ4 953 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 C1orf52Q8N6N3 182 aaKnown RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 FAM151AQ8WW52 585 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 CNOT9Q92600 299 aaKnown RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 IMP4Q96G21 291 aaKnown RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 HIST1H2AHQ96KK5 128 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 PANX1Q96RD7 426 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 HIST1H2AJQ99878 128 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 SPRTNQ9H040 489 aaPredicted RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 ABCC13Q9NSE7 274 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 DNAJC11Q9NVH1 559 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 UXTQ9UBK9 157 aaPredicted RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 FTSJ1Q9UET6 329 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 ING1Q9UK53 422 aaPredicted RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 SLC6A5Q9Y345 797 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 FPGTO14772 594 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 GNB5O14775 395 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 CPSF4O95639 269 aaKnown RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 IGHA2P01877 340 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 HPXP02790 462 aa12.63□□□□□ -0.39
IFT88-202ENST00000351808 IGFBP1P08833 259 aaPredicted RBP12.63□□□□□ -0.39
IFT88-202ENST00000351808 SELLP14151 372 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms