RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TCEA1P23193 301 aaKnown RBP13.21□□□□□ -0.29
TRIM4-201ENST00000349062 SERPINB1P30740 379 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 CTHP32929 405 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 TGFBR1P36897 503 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 SLAMF1Q13291 335 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 EXOC3L2Q2M3D2 409 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 LEXMQ3ZCV2 418 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 NDUFAF5Q5TEU4 345 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 EIF3MQ7L2H7 374 aaKnown RBP13.21□□□□□ -0.29
TRIM4-201ENST00000349062 RTL10Q7L3V2 364 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 LRRC56Q8IYG6 542 aaPredicted RBP13.21□□□□□ -0.29
TRIM4-201ENST00000349062 SPARTQ8N0X7 666 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 FAM160A2Q8N612 972 aaPredicted RBP13.21□□□□□ -0.29
TRIM4-201ENST00000349062 ALPK1Q96QP1 1244 aa13.21□□□□□ -0.29
TRIM4-201ENST00000349062 ABCA7Q8IZY2 2146 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 C17orf113A0A1B0GUU1 675 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 LINC00854A0A1B0GVQ3 168 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 TCRBV21S2A2A0A5A6 115 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 ZNF701M0R085 212 aaPredicted RBP13.21□□□□□ -0.3
TRIM4-201ENST00000349062 NDUFB5O43674 189 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 INHBBP09529 407 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 NR2F1P10589 423 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 HSD3B1P14060 373 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 TYRP1P17643 537 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 HSD3B2P26439 372 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 DNAJA1P31689 397 aaKnown RBP13.21□□□□□ -0.3
TRIM4-201ENST00000349062 CRYBA2P53672 197 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 DSTNP60981 165 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 CSNK1G2P78368 415 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 BTN3A2P78410 334 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 SF3B4Q15427 424 aaKnown RBP eCLIP13.21□□□□□ -0.34e-9■■■■■ 33.4
TRIM4-201ENST00000349062 FAM71E1Q6IPT2 247 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 ADAMTSL4Q6UY14 1074 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 P3H2Q8IVL5 708 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 SVOPLQ8N434 492 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 NDNFQ8TB73 568 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 OR1E3Q8WZA6 343 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 COX14Q96I36 57 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 MAGEB10Q96LZ2 347 aaPredicted RBP13.21□□□□□ -0.3
TRIM4-201ENST00000349062 TEFMQ96QE5 360 aaKnown RBP13.21□□□□□ -0.3
TRIM4-201ENST00000349062 EHD1Q9H4M9 534 aa13.21□□□□□ -0.3
TRIM4-201ENST00000349062 ABCB7O75027 752 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 ADH1BP00325 375 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 BCL6P41182 706 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 NR4A2P43354 598 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 TMBIM6P55061 237 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 HOXC5Q00444 222 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 SYPL1Q16563 259 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 SYT16Q17RD7 645 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 TOR1AIP1Q5JTV8 583 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 ERICH5Q6P6B1 374 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 UNC5DQ6UXZ4 953 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 CBLL1Q75N03 491 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 C6orf120Q7Z4R8 191 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 LGI4Q8N135 537 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 HCAR2Q8TDS4 363 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 PHF10Q8WUB8 498 aaKnown RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 STARD8Q92502 1023 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 MRPL38Q96DV4 380 aaKnown RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 RBCK1Q9BYM8 510 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 TPSD1Q9BZJ3 242 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 EPHX3Q9H6B9 360 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 NFKBIL1Q9UBC1 381 aaPredicted RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 ASXL3Q9C0F0 2248 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 PRPH2P23942 346 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 BUD31P41223 144 aaPredicted RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 RAB28P51157 221 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 RPP38P78345 283 aaKnown RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 HEPACAMQ14CZ8 416 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 ZNF765Q7L2R6 523 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 CHCHD4Q8N4Q1 142 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 TM4SF18Q96CE8 201 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 IL4I1Q96RQ9 567 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 NODALQ96S42 347 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 ZNF347Q96SE7 839 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 DOHHQ9BU89 302 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 CLEC1BQ9P126 229 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 C1orf226A1L170 272 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 SLC1A7O00341 560 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 STK25O00506 426 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 CAPN5O15484 640 aaPredicted RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 PRMT3O60678 531 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 GCM2O75603 506 aaPredicted RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 TBX6O95947 436 aaPredicted RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 IGFBP1P08833 259 aaPredicted RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 CHRM5P08912 532 aaPredicted RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 KIR2DL1P43626 348 aaPredicted RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 CCT3P49368 545 aaKnown RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 CLK3P49761 638 aaKnown RBP13.2□□□□□ -0.3
TRIM4-201ENST00000349062 NCS1P62166 190 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 GPR19Q15760 415 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 GPAT3Q53EU6 434 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 LCTLQ6UWM7 567 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 TMEM107Q6UX40 140 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 NUDT13Q86X67 352 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 LAS2Q8IYD9 372 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 SYNPOQ8N3V7 929 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 SCAIQ8N9R8 606 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 OR10G2Q8NGC3 310 aa13.2□□□□□ -0.3
TRIM4-201ENST00000349062 RGMAQ96B86 450 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms