RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 CPAMD8Q8IZJ3 1885 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 GOLGA8QA0A0J9YX86 632 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 GOLGA8OA6NCC3 632 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 TMEM233B4DJY2 109 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 GOLGA8NF8WBI6 632 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 CYR61O00622 381 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 SDHDO14521 159 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 CLGNO14967 610 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 MGRN1O60291 552 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 EPHA3P29320 983 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 EEF1DP29692 281 aaKnown RBP15.06■□□□□ 0
RAB5C-201ENST00000346213 PCBP2Q15366 365 aaKnown RBP eCLIP15.06■□□□□ 07e-8■■□□□ 12.3
RAB5C-201ENST00000346213 NSDHLQ15738 373 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 PAPD4Q6PIY7 484 aaKnown RBP15.06■□□□□ 0
RAB5C-201ENST00000346213 NFAM1Q8NET5 270 aaPredicted RBP15.06■□□□□ 0
RAB5C-201ENST00000346213 OR2L5Q8NG80 312 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 BARD1Q99728 777 aaKnown RBP15.06■□□□□ 0
RAB5C-201ENST00000346213 EFCAB11Q9BUY7 163 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 REXO4Q9GZR2 422 aaKnown RBP15.06■□□□□ 0
RAB5C-201ENST00000346213 OR51B5Q9H339 312 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 MEAF6Q9HAF1 191 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 TNFRSF12AQ9NP84 129 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 TAS2R1Q9NYW7 299 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 KCMF1Q9P0J7 381 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 ZNF223Q9UK11 482 aaPredicted RBP15.06■□□□□ 0
RAB5C-201ENST00000346213 RNF11Q9Y3C5 154 aa15.06■□□□□ 0
RAB5C-201ENST00000346213 FLNBO75369 2602 aaKnown RBP15.06■□□□□ 0
RAB5C-201ENST00000346213 SCN2AQ99250 2005 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 TCRBV16S1A1N1A0A5B0 115 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 E9PBE3 544 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 SLC22A2O15244 555 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 KLHL41O60662 606 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 PRKRAO75569 313 aaKnown RBP15.05■□□□□ -0
RAB5C-201ENST00000346213 TGFB1P01137 390 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 JUNP05412 331 aaKnown RBP15.05■□□□□ -0
RAB5C-201ENST00000346213 TSPAN8P19075 237 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 CXCR2P25025 360 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 PRDX6P30041 224 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 ADSLP30566 484 aaPredicted RBP15.05■□□□□ -0
RAB5C-201ENST00000346213 CDH13P55290 713 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 CLCQ05315 142 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 BTKQ06187 659 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 BTBD16Q32M84 506 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 PLAG1Q6DJT9 500 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 GRHL2Q6ISB3 625 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 ISLR2Q6UXK2 745 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 RINLQ6ZS11 566 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 CLYBLQ8N0X4 340 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 KRT78Q8N1N4 520 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 CPSF7Q8N684 471 aaKnown RBP15.05■□□□□ -0
RAB5C-201ENST00000346213 CEP70Q8NHQ1 597 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 ACTRT2Q8TDY3 377 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 ZNF483Q8TF39 744 aaPredicted RBP15.05■□□□□ -0
RAB5C-201ENST00000346213 UCN3Q969E3 161 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 ZNF225Q9UK10 706 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 PCTPQ9UKL6 214 aa15.05■□□□□ -0
RAB5C-201ENST00000346213 WASHC1A8K0Z3 465 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 A8MUA0 341 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 B2RBV5 119 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 GYG2O15488 501 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 WDPCPO95876 746 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 S100BP04271 92 aaPredicted RBP15.04■□□□□ -0
RAB5C-201ENST00000346213 ALPPP05187 535 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 PCNAP12004 261 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 NEK2P51955 445 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 LIM2P55344 173 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 SLC26A5P58743 744 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 TRAF3Q13114 568 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 KLF10Q13118 480 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 RIPK1Q13546 671 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 ZNF468Q5VIY5 522 aaPredicted RBP15.04■□□□□ -0
RAB5C-201ENST00000346213 QSOX2Q6ZRP7 698 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 HUS1BQ8NHY5 278 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 PTCHD1Q96NR3 888 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 TAAR6Q96RI8 345 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 MAPKAP1Q9BPZ7 522 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 CADM1Q9BY67 442 aaKnown RBP15.04■□□□□ -0
RAB5C-201ENST00000346213 HES7Q9BYE0 225 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 C1orf21Q9H246 121 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 ZNF385DQ9H6B1 395 aa15.04■□□□□ -0
RAB5C-201ENST00000346213 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.04■□□□□ -0
RAB5C-201ENST00000346213 GSC2O15499 205 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 RNH1P13489 461 aaKnown RBP15.03■□□□□ -0
RAB5C-201ENST00000346213 MNAT1P51948 309 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 GTF2A1P52655 376 aaPredicted RBP15.03■□□□□ -0
RAB5C-201ENST00000346213 STXBP1P61764 594 aaKnown RBP15.03■□□□□ -0
RAB5C-201ENST00000346213 LCP2Q13094 533 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 GTF2H2Q13888 395 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 UGT3A2Q3SY77 523 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 H3F3CQ6NXT2 135 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 GTF2H2CQ6P1K8 395 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 ZADH2Q8N4Q0 377 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 TBC1D19Q8N5T2 526 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 DNAJB14Q8TBM8 379 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 WDR20Q8TBZ3 569 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 AGAP11Q8TF27 550 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 METTL21AQ8WXB1 218 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 CMTM5Q96DZ9 223 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 PPP1R36Q96LQ0 422 aa15.03■□□□□ -0
RAB5C-201ENST00000346213 MAGEB10Q96LZ2 347 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms