RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 MANEAQ5SRI9 462 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 TMEM71Q6P5X7 295 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 TRIM40Q6P9F5 258 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 PRR23CQ6ZRP0 262 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 TMEM132CQ8N3T6 1108 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 SRFBP1Q8NEF9 429 aaKnown RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 ZCCHC10Q8TBK6 192 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 IFI44Q8TCB0 444 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 KLHL6Q8WZ60 621 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 OR52E6Q96RD3 313 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 ZBTB18Q99592 522 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 LRRN3Q9H3W5 708 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 REEP4Q9H6H4 257 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 ARMC1Q9NVT9 282 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 ADA2Q9NZK5 511 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 LEF1Q9UJU2 399 aaPredicted RBP13.91□□□□□ -0.18
CXCL12-201ENST00000343575 ATG4BQ9Y4P1 393 aa13.91□□□□□ -0.18
CXCL12-201ENST00000343575 ADAMTS20P59510 1910 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 A8MU76 341 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 SRPX2O60687 465 aaPredicted RBP13.9□□□□□ -0.18
CXCL12-201ENST00000343575 COX7A2P14406 83 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 HOXB9P17482 250 aaPredicted RBP13.9□□□□□ -0.18
CXCL12-201ENST00000343575 S100A3P33764 101 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 GRK6P43250 576 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 TSFMP43897 325 aaKnown RBP13.9□□□□□ -0.18
CXCL12-201ENST00000343575 PLIN5Q00G26 463 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 SPEM2Q0P670 501 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 SLAMF1Q13291 335 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 CAPRIN1Q14444 709 aaKnown RBP13.9□□□□□ -0.18
CXCL12-201ENST00000343575 SPATS1Q496A3 300 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 DEFB134Q4QY38 66 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 INTS11Q5TA45 600 aaKnown RBP13.9□□□□□ -0.18
CXCL12-201ENST00000343575 MSRB3Q8IXL7 192 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 KIAA2013Q8IYS2 634 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 D2HGDHQ8N465 521 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 ROPN1LQ96C74 230 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 LRRC58Q96CX6 371 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 HSPBAP1Q96EW2 488 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 DOK1Q99704 481 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 TRIM8Q9BZR9 551 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 IL1RL2Q9HB29 575 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 PDE7BQ9NP56 450 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 PARD6AQ9NPB6 346 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 SPAG4Q9NPE6 437 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 SOHLH2Q9NX45 425 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 PACSIN3Q9UKS6 424 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 PLCL2Q9UPR0 1127 aa13.9□□□□□ -0.18
CXCL12-201ENST00000343575 A0A1W2PR48 441 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 PRKRAO75569 313 aaKnown RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 CPNE6O95741 557 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 FOLR1P15328 257 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 ALOX12P18054 663 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 NELFEP18615 380 aaKnown RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 EFNA1P20827 205 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 MYF6P23409 242 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 MLLT3P42568 568 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 KIR3DL1P43629 444 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 HSD11B2P80365 405 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 DAB2P98082 770 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 SRSF11Q05519 484 aaKnown RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 RUNX2Q13950 521 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 SUZ12Q15022 739 aaKnown RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 DPY19L1Q2PZI1 675 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 ZBTB49Q6ZSB9 765 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 IKBIPQ70UQ0 350 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 ANKRD46Q86W74 232 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 PCYOX1LQ8NBM8 494 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 TFAP2CQ92754 450 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 ATOH1Q92858 354 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 ISOC1Q96CN7 298 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 C10orf90Q96M02 699 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 MAPKAP1Q9BPZ7 522 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 INPP5KQ9BT40 448 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 KCNH6Q9H252 994 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 ENAMQ9NRM1 1142 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 SEMA4GQ9NTN9 838 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 FAM86C1Q9NVL1 165 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 SLC25A37Q9NYZ2 338 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 KCMF1Q9P0J7 381 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 SLC22A7Q9Y694 548 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 COL5A1P20908 1838 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 EP300Q09472 2414 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 MUC6Q6W4X9 2439 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 TRBV5-3A0A0A0MS03 114 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 IGHV5-10-1A0A0J9YXX1 117 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 NTN3O00634 580 aaPredicted RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 FLRT2O43155 660 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 C1QCP02747 245 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 IL1RNP18510 177 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 DDCP20711 480 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 SLC6A2P23975 617 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 CDKN2CP42773 168 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 TRA2BP62995 288 aaKnown RBP13.89□□□□□ -0.19
CXCL12-201ENST00000343575 NFYCQ13952 458 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 SLC9A5Q14940 896 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 C16orf72Q14CZ0 275 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 MAPKAPK3Q16644 382 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 NRF1Q16656 503 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 GTDC1Q4AE62 458 aa13.89□□□□□ -0.19
CXCL12-201ENST00000343575 NHSL2Q5HYW2 709 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms