RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 DNAJA3Q96EY1 480 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 SLC6A15Q9H2J7 730 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 OR51I1Q9H343 314 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 INTS6Q9UL03 887 aaKnown RBP7.73□□□□□ -1.17
UBE4B-202ENST00000343090 EDARQ9UNE0 448 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 PCDHB14Q9Y5E9 798 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 MAGED1Q9Y5V3 778 aaPredicted RBP7.73□□□□□ -1.17
UBE4B-202ENST00000343090 REM1O75628 298 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 LCKP06239 509 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 LAMP1P11279 417 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 CD9P21926 228 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 F8A1P23610 371 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 SHMT2P34897 504 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 MAGEA6P43360 314 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 RBBP4Q09028 425 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 GRSF1Q12849 480 aaKnown RBP eCLIP7.73□□□□□ -1.17
UBE4B-202ENST00000343090 UGT8Q16880 541 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 BCL7AQ4VC05 210 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 PXDC1Q5TGL8 231 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 ZNF676Q8N7Q3 588 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 C12orf76Q8N812 135 aaPredicted RBP7.73□□□□□ -1.17
UBE4B-202ENST00000343090 CHST14Q8NCH0 376 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 PROKR2Q8NFJ6 384 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 CD200R1Q8TD46 325 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 METTL21AQ8WXB1 218 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 ZBED3Q96IU2 234 aaPredicted RBP7.73□□□□□ -1.17
UBE4B-202ENST00000343090 ASPNQ9BXN1 380 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 RANGRFQ9HD47 186 aaPredicted RBP7.73□□□□□ -1.17
UBE4B-202ENST00000343090 SPHK2Q9NRA0 654 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 MEIOCA2RUB1 952 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 M0R233 179 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 TYRP1P17643 537 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 UQCRC2P22695 453 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 SLC6A4P31645 630 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 EVI2BP34910 448 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 OR3A3P47888 321 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 OR12D2P58182 307 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 VLDLRP98155 873 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 NPRL3Q12980 569 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 ADGRG5Q8IZF4 528 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 PARP16Q8N5Y8 322 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 SLC35B4Q969S0 331 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 ZSWIM3Q96MP5 696 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 ABCG4Q9H172 646 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 TLR9Q9NR96 1032 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 GPR83Q9NYM4 423 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 GMPR2Q9P2T1 348 aaKnown RBP7.73□□□□□ -1.17
UBE4B-202ENST00000343090 GPN3Q9UHW5 284 aaPredicted RBP7.73□□□□□ -1.17
UBE4B-202ENST00000343090 PCDHB11Q9Y5F2 797 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 ALS2Q96Q42 1657 aa7.73□□□□□ -1.17
UBE4B-202ENST00000343090 ATP6V1G2-DDX39BF2Z307 99 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 M0QZQ0 153 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 MEN1O00255 615 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 CAPN5O15484 640 aaPredicted RBP7.72□□□□□ -1.17
UBE4B-202ENST00000343090 RHOP08100 348 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 GPX3P22352 226 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 MAP2K3P46734 347 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 NRIP1P48552 1158 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 AP3S2P59780 193 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 EMX1Q04741 257 aaPredicted RBP7.72□□□□□ -1.17
UBE4B-202ENST00000343090 NFE2L1Q14494 772 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 TCEAL5Q5H9L2 206 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 ZNF627Q7L945 461 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 PKD1L3Q7Z443 1732 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 FAM217AQ8IXS0 508 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 LNX2Q8N448 690 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 DEFB119Q8N690 84 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 OR51G2Q8NGK0 314 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 DNAJA4Q8WW22 397 aaPredicted RBP7.72□□□□□ -1.17
UBE4B-202ENST00000343090 TMEM125Q96AQ2 219 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 SLC30A3Q99726 388 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 MGME1Q9BQP7 344 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 GON7Q9BXV9 100 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 C11orf49Q9H6J7 331 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 KCNK12Q9HB15 430 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 SDR39U1Q9NRG7 319 aaPredicted RBP7.72□□□□□ -1.17
UBE4B-202ENST00000343090 CUEDC1Q9NWM3 386 aaPredicted RBP7.72□□□□□ -1.17
UBE4B-202ENST00000343090 C5AR2Q9P296 337 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 AASSQ9UDR5 926 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 CACNA1SQ13698 1873 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 N4BP2Q86UW6 1770 aaPredicted RBP7.72□□□□□ -1.17
UBE4B-202ENST00000343090 E7EQ34 232 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 ACOT8O14734 319 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 NUPL2O15504 423 aaKnown RBP7.72□□□□□ -1.17
UBE4B-202ENST00000343090 MTRF1O75570 445 aaKnown RBP7.72□□□□□ -1.17
UBE4B-202ENST00000343090 CLDN8P56748 225 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 GHRHRQ02643 423 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 KCNC3Q14003 757 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 CRTC1Q6UUV9 634 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 TOMM5Q8N4H5 51 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 OR6C4Q8NGE1 309 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 C1orf216Q8TAB5 229 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 SMPDL3BQ92485 455 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 CNDP2Q96KP4 475 aaKnown RBP7.72□□□□□ -1.17
UBE4B-202ENST00000343090 SNX18Q96RF0 628 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 MCCC1Q96RQ3 725 aaPredicted RBP7.72□□□□□ -1.17
UBE4B-202ENST00000343090 FEVQ99581 238 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 MCHR1Q99705 422 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 PIP5K1AQ99755 562 aa7.72□□□□□ -1.17
UBE4B-202ENST00000343090 GNG8Q9UK08 70 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms