RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 CFAP46Q8IYW2 2715 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 SUPT3HB4E1H0 165 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 H0YIG0 161 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 PRAMEF4O60810 478 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 SUPT3HO75486 399 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 NSA2O95478 260 aaKnown RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 UMODP07911 640 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 SLC35G6P0C7Q6 338 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 C1GALT1C1LP0DN25 315 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 GSTM2P28161 218 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 FOLR3P41439 243 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 OR1D4P47884 311 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 SSPNQ14714 243 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 RASA2Q15283 850 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 DEFB109BQ30KR1 87 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 FAM69BQ5VUD6 431 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 PRAMEF9Q5VWM5 478 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 MLIPQ5VWP3 458 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 METTL2BQ6P1Q9 378 aaKnown RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 TBC1D19Q8N5T2 526 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 AMER3Q8N944 861 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 ANKRD53Q8N9V6 530 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 APOBEC4Q8WW27 367 aaKnown RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 SLC13A3Q8WWT9 602 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 EXT2Q93063 718 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 MTFMTQ96DP5 389 aaKnown RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 PSMG3-AS1Q96PY0 264 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 PSMC3IPQ9P2W1 217 aaPredicted RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 CTSFQ9UBX1 484 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 PTRH2Q9Y3E5 179 aaKnown RBP9.7□□□□□ -0.86
TPM3-207ENST00000341372 SLC22A7Q9Y694 548 aa9.7□□□□□ -0.86
TPM3-207ENST00000341372 KALRNO60229 2985 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 OR1F1O43749 312 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 DEAF1O75398 565 aaPredicted RBP9.69□□□□□ -0.86
TPM3-207ENST00000341372 RBP1P09455 135 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 FBLP22087 321 aaKnown RBP9.69□□□□□ -0.86
TPM3-207ENST00000341372 CXCR2P25025 360 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 CCR10P46092 362 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 GLRBP48167 497 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 ALDH18A1P54886 795 aaKnown RBP9.69□□□□□ -0.86
TPM3-207ENST00000341372 RPS16P62249 146 aaKnown RBP9.69□□□□□ -0.86
TPM3-207ENST00000341372 EFR3AQ14156 821 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 TBCCQ15814 346 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 PDK4Q16654 411 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 HSP90B2PQ58FF3 399 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 FBXO48Q5FWF7 155 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 MRGPREQ86SM8 312 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 LCA5Q86VQ0 697 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 TDRPQ86YL5 185 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 RAB43Q86YS6 212 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 METTL27Q8N6F8 245 aaPredicted RBP9.69□□□□□ -0.86
TPM3-207ENST00000341372 EXD3Q8N9H8 876 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 OR1N1Q8NGS0 311 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 ACMSDQ8TDX5 336 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 CREB3L4Q8TEY5 395 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 ESAMQ96AP7 390 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 TLCD1Q96CP7 247 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 ATP6V1G3Q96LB4 118 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 IP6K3Q96PC2 410 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 DMRTA2Q96SC8 542 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 PRSS50Q9UI38 385 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 SCOCQ9UIL1 159 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 MAU2Q9Y6X3 613 aa9.69□□□□□ -0.86
TPM3-207ENST00000341372 BSNQ9UPA5 3926 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 IQANK1A0A1B0GTG1 560 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 K7EPI3 171 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 PIP5K1BO14986 540 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 CD22P20273 847 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 PRKAA2P54646 552 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 POLE2P56282 527 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 RPUSD3Q6P087 351 aaKnown RBP9.68□□□□□ -0.86
TPM3-207ENST00000341372 TMEM151BQ8IW70 566 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 TRPV3Q8NET8 790 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 TTLQ8NG68 377 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 PTCD3Q96EY7 689 aaKnown RBP9.68□□□□□ -0.86
TPM3-207ENST00000341372 EFCAB11Q9BUY7 163 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 CXorf56Q9H5V9 222 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 SACM1LQ9NTJ5 587 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 C14orf105Q9NVL8 296 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 XPR1Q9UBH6 696 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 ZNF282Q9UDV7 671 aaPredicted RBP9.68□□□□□ -0.86
TPM3-207ENST00000341372 TMCO1Q9UM00 188 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 A0A0A6YYC8 382 aaPredicted RBP9.68□□□□□ -0.86
TPM3-207ENST00000341372 A0A1W2PQ72 361 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 I3L1I5 382 aaPredicted RBP9.68□□□□□ -0.86
TPM3-207ENST00000341372 CLGNO14967 610 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 NDUFS4O43181 175 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 CCNT2O60583 730 aaKnown RBP9.68□□□□□ -0.86
TPM3-207ENST00000341372 PTP4A3O75365 173 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 STATHP02808 62 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 SERPINA6P08185 405 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 FAM87AP0C7U9 286 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 SMIM10L1P0DMW3 83 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 MMP11P24347 488 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 AVPR1BP47901 424 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 AGTR2P50052 363 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 FOXL2P58012 376 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 GABPB1Q06547 395 aaPredicted RBP9.68□□□□□ -0.86
TPM3-207ENST00000341372 RGS1Q08116 209 aa9.68□□□□□ -0.86
TPM3-207ENST00000341372 PRSS41Q7RTY9 318 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms