RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 FAM153CQ494X1 144 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 KRTCAP3Q53RY4 240 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 SPINK14Q6IE38 97 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 MRM1Q6IN84 353 aaKnown RBP12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 PAGE2Q7Z2X7 111 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 MILR1Q7Z6M3 343 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 SLC22A9Q8IVM8 553 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 TMEM151AQ8N4L1 468 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 TMEM156Q8N614 296 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 AMER2Q8N7J2 671 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 POGLUT1Q8NBL1 392 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 PTPMT1Q8WUK0 201 aaPredicted RBP12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 ART5Q96L15 291 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 CDK15Q96Q40 435 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 ZNF717Q9BY31 904 aaPredicted RBP12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 PARD6BQ9BYG5 372 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 BRF2Q9HAW0 419 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 ZBTB26Q9HCK0 441 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 NMRK1Q9NWW6 199 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 ANKRD10Q9NXR5 420 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 COPS7AQ9UBW8 275 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 ERRFI1Q9UJM3 462 aaPredicted RBP12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 SNX6Q9UNH7 406 aa12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 KLF13Q9Y2Y9 288 aaPredicted RBP12.42□□□□□ -0.42
SIRPB3P-201ENST00000340424 PROM1O43490 865 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 LDB3O75112 727 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 ITGA10O75578 1167 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 LDLRP01130 860 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 SBK3P0C264 359 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 FAM58BPP0C7Q3 252 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 NR2F6P10588 404 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 ATP5F1P24539 256 aaPredicted RBP12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 BSGP35613 385 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 SSR4P51571 173 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 NAA20P61599 178 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 SPTAN1Q13813 2472 aaKnown RBP12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 RASA2Q15283 850 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 DOPEY1Q5JWR5 2465 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 TEX35Q5T0J7 233 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 GFRALQ6UXV0 394 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 ST13P4Q8IZP2 240 aaPredicted RBP12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 RNF175Q8N4F7 328 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 OR4F6Q8NGB9 312 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 OR5L2Q8NGL0 311 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 SLC2A12Q8TD20 617 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 THAP3Q8WTV1 239 aaPredicted RBP12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 ANKRD9Q96BM1 317 aaPredicted RBP12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 CCDC126Q96EE4 140 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 RBM18Q96H35 190 aaKnown RBP12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 NSUN5Q96P11 429 aaKnown RBP12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 DGAT2Q96PD7 388 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 SORBS1Q9BX66 1292 aaKnown RBP12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 EPB41L4BQ9H329 900 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 SEMA4BQ9NPR2 832 aaPredicted RBP12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 KLHL1Q9NR64 748 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 MYOTQ9UBF9 498 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 SEC14L3Q9UDX4 400 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 TRPS1Q9UHF7 1281 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 DCDC2Q9UHG0 476 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 ZNF223Q9UK11 482 aaPredicted RBP12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 OSGIN2Q9Y236 505 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 ATG4BQ9Y4P1 393 aa12.41□□□□□ -0.42
SIRPB3P-201ENST00000340424 ARHGAP10A1A4S6 786 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 KLRC4-KLRK1H3BQV0 150 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 FGF17O60258 216 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 GUCY1B2O75343 617 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 GPR75O95800 540 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 HSD3B1P14060 373 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 ALOX15P16050 662 aaPredicted RBP12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 HSD3B2P26439 372 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 GALNSP34059 522 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 NEK2P51955 445 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 ALDH6A1Q02252 535 aaKnown RBP12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 FOLH1Q04609 750 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 CLCQ05315 142 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 MAPKAPK3Q16644 382 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 ZNF678Q5SXM1 525 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 ZNF468Q5VIY5 522 aaPredicted RBP12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 OR52E8Q6IFG1 317 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 WDR93Q6P2C0 686 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 GALNTL5Q7Z4T8 443 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 TDRPQ86YL5 185 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 CYP4Z2PQ8N1L4 340 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 TRPC4APQ8TEL6 797 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 FBXL20Q96IG2 436 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 FRMD6Q96NE9 622 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 ZNF382Q96SR6 550 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 OR8D2Q9GZM6 311 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 ANKZF1Q9H8Y5 726 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 TIMMDC1Q9NPL8 285 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 TMEM216Q9P0N5 145 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 ASB4Q9Y574 426 aa12.4□□□□□ -0.42
SIRPB3P-201ENST00000340424 SPTBN1Q01082 2364 aaKnown RBP12.4□□□□□ -0.43
SIRPB3P-201ENST00000340424 A8MVJ9 347 aa12.39□□□□□ -0.43
SIRPB3P-201ENST00000340424 H3BQF6 201 aa12.39□□□□□ -0.43
SIRPB3P-201ENST00000340424 LRRTM2O43300 516 aa12.39□□□□□ -0.43
SIRPB3P-201ENST00000340424 TMPRSS11DO60235 418 aa12.39□□□□□ -0.43
SIRPB3P-201ENST00000340424 GLRA3O75311 464 aa12.39□□□□□ -0.43
SIRPB3P-201ENST00000340424 ERLIN1O75477 346 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms