RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 PROKR2Q8NFJ6 384 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 RORBQ92753 470 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 IL37Q9NZH6 218 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 FBXO4Q9UKT5 387 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 POFUT2Q9Y2G5 429 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 BLACEA4D250 179 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 MKRN2OSH3BPM6 223 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 GSC2O15499 205 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 ZNF84P51523 738 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 EFR3AQ14156 821 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 ZNF630Q2M218 657 aaPredicted RBP12.22□□□□□ -0.45
LIN54-201ENST00000340417 GPR141Q7Z602 305 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 GALNT5Q7Z7M9 940 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 FBXW8Q8N3Y1 598 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 TMEM178AQ8NBL3 297 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 EURLQ9NYK6 297 aa12.22□□□□□ -0.45
LIN54-201ENST00000340417 MRPS2Q9Y399 296 aaKnown RBP12.22□□□□□ -0.45
LIN54-201ENST00000340417 CPSF4LA6NMK7 179 aaKnown RBP12.21□□□□□ -0.45
LIN54-201ENST00000340417 MAT1AQ00266 395 aaKnown RBP12.21□□□□□ -0.45
LIN54-201ENST00000340417 ATG9BQ674R7 924 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 FRRS1Q6ZNA5 592 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 ZFAND4Q86XD8 727 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 GIPC3Q8TF64 312 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 MYDGFQ969H8 173 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 PCDHGB5Q9Y5G0 923 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 EPOPA6NHQ4 379 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 K7ESM1 405 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 HTRA2O43464 458 aaPredicted RBP12.21□□□□□ -0.45
LIN54-201ENST00000340417 PRDX1Q06830 199 aaKnown RBP12.21□□□□□ -0.45
LIN54-201ENST00000340417 PYCR3Q53H96 274 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 PIP5KL1Q5T9C9 394 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 SLC2A7Q6PXP3 512 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 IL20RBQ6UXL0 311 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 PGAM4Q8N0Y7 254 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 RHBDF1Q96CC6 855 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 DNAJA3Q96EY1 480 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 HOXD1Q9GZZ0 328 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 SLC35C2Q9NQQ7 365 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 NLGN3Q9NZ94 848 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 KLHL42Q9P2K6 505 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 ERVK-19Q9WJR5 959 aa12.21□□□□□ -0.45
LIN54-201ENST00000340417 ACADSP16219 412 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 ITGADQ13349 1161 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 SMU1Q2TAY7 513 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.21□□□□□ -0.46
LIN54-201ENST00000340417 AGBL4Q5VU57 503 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 DGLUCYQ7Z3D6 616 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 ZNF480Q8WV37 535 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 IGHV1OR15-9A0A0B4J2B8 117 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 CHST10O43529 356 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 MT-CO3P00414 261 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 SERPINA3P01011 423 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 PABPC4LP0CB38 370 aaKnown RBP12.21□□□□□ -0.46
LIN54-201ENST00000340417 TAS2R38P59533 333 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 ST3GAL3Q11203 375 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 TMEM92Q6UXU6 159 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 HIPK1Q86Z02 1210 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 ZDHHC21Q8IVQ6 265 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 CAPSLQ8WWF8 208 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 OR51I1Q9H343 314 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 MCM3APO60318 1980 aa12.21□□□□□ -0.46
LIN54-201ENST00000340417 LDB3O75112 727 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 TAZQ16635 292 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 C1orf94Q6P1W5 598 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 BMP8AQ7Z5Y6 402 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 LIX1LQ8IVB5 337 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.2□□□□□ -0.46
LIN54-201ENST00000340417 GALNT6Q8NCL4 622 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 ARNT2Q9HBZ2 717 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 KCMF1Q9P0J7 381 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 ARFIP1P53367 373 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 ZNF789Q5FWF6 425 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 TMPRSS11AQ6ZMR5 421 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 BBS10Q8TAM1 723 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 C16orf78Q8WTQ4 265 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 GEMIN6Q8WXD5 167 aaKnown RBP12.2□□□□□ -0.46
LIN54-201ENST00000340417 CCDC74BQ96LY2 380 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 NFKBIL1Q9UBC1 381 aaPredicted RBP12.2□□□□□ -0.46
LIN54-201ENST00000340417 CAB39Q9Y376 341 aaPredicted RBP12.2□□□□□ -0.46
LIN54-201ENST00000340417 ZCWPW2A0A1B0GU75 182 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 SF3A2Q15428 464 aaKnown RBP12.2□□□□□ -0.46
LIN54-201ENST00000340417 C5orf22Q49AR2 442 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 UNC50Q53HI1 259 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 CDKL4Q5MAI5 379 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 CARD17Q5XLA6 110 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 COMMD6Q7Z4G1 85 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 MCTS1Q9ULC4 181 aaKnown RBP12.2□□□□□ -0.46
LIN54-201ENST00000340417 LIPT1Q9Y234 373 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 WBP11Q9Y2W2 641 aaKnown RBP12.2□□□□□ -0.46
LIN54-201ENST00000340417 OR5K3A6NET4 321 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 PRDX6P30041 224 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 EIF1AXP47813 144 aaKnown RBP12.2□□□□□ -0.46
LIN54-201ENST00000340417 ADGRE1Q14246 886 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 LIN52Q52LA3 116 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 TRAF7Q6Q0C0 670 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 ACOT4Q8N9L9 421 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 CGREF1Q99674 301 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 CUEDC1Q9NWM3 386 aaPredicted RBP12.2□□□□□ -0.46
LIN54-201ENST00000340417 GRHPRQ9UBQ7 328 aa12.2□□□□□ -0.46
LIN54-201ENST00000340417 TBC1D29Q9UFV1 150 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms