RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 A0A1W2PR48 441 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 OR6C76A6NM76 312 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 ARPC2O15144 300 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 P2RX6O15547 441 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 GPR75O95800 540 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 CPN2P22792 545 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 MAOBP27338 520 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 DGKQP52824 942 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 CSRP2Q16527 193 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 OR2L13Q8N349 312 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 CHDHQ8NE62 594 aaPredicted RBP6.77□□□□□ -1.33
NUP43-201ENST00000340413 SIRT3Q9NTG7 399 aaPredicted RBP6.77□□□□□ -1.33
NUP43-201ENST00000340413 DCAF13Q9NV06 445 aaKnown RBP6.77□□□□□ -1.33
NUP43-201ENST00000340413 NXT1Q9UKK6 140 aaKnown RBP6.77□□□□□ -1.33
NUP43-201ENST00000340413 PCDHGA8Q9Y5G5 932 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 BRWD1Q9NSI6 2320 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 SLC9B1P1A6NJY1 282 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 PROB1E7EW31 1015 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 DKK1O94907 266 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 HPRP00739 348 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 RAP2AP10114 183 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 ETS2P15036 469 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 VHLP40337 213 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 NBL1P41271 181 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 MVDP53602 400 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 PCBP3P57721 371 aaKnown RBP6.77□□□□□ -1.33
NUP43-201ENST00000340413 RAB15P59190 212 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 SPIDRQ14159 915 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 MPEG1Q2M385 716 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 TRIM61Q5EBN2 209 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 RHBDD2Q6NTF9 364 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 EIF3MQ7L2H7 374 aaKnown RBP6.77□□□□□ -1.33
NUP43-201ENST00000340413 HPS6Q86YV9 775 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 SLITRK4Q8IW52 837 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 C17orf47Q8NEP4 570 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 NACC2Q96BF6 587 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 CTHRC1Q96CG8 243 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 RSRC1Q96IZ7 334 aaKnown RBP6.77□□□□□ -1.33
NUP43-201ENST00000340413 MS4A4EQ96PG1 132 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 KLHL31Q9H511 634 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 BAIAP2L1Q9UHR4 511 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 ANAPC2Q9UJX6 822 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 UTS2RQ9UKP6 389 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 PPIEQ9UNP9 301 aaKnown RBP6.77□□□□□ -1.33
NUP43-201ENST00000340413 C19orf53Q9UNZ5 99 aaPredicted RBP6.77□□□□□ -1.33
NUP43-201ENST00000340413 CFL2Q9Y281 166 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 HEATR5BQ9P2D3 2071 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 ADAMTS9Q9P2N4 1935 aa6.77□□□□□ -1.33
NUP43-201ENST00000340413 TMEM247A6NEH6 219 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 ARRDC5A6NEK1 342 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 H3BNX3 289 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 CLDN4O14493 209 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 SIGLEC6O43699 453 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 KCNK5O95279 499 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 LDOC1O95751 146 aaPredicted RBP6.76□□□□□ -1.33
NUP43-201ENST00000340413 IGHEP01854 428 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 ANPEPP15144 967 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 PORP16435 677 aaPredicted RBP6.76□□□□□ -1.33
NUP43-201ENST00000340413 ENGP17813 658 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 BTN3A2P78410 334 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 ATP6AP1Q15904 470 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 FAM98BQ52LJ0 330 aaKnown RBP6.76□□□□□ -1.33
NUP43-201ENST00000340413 OGFRL1Q5TC84 451 aaPredicted RBP6.76□□□□□ -1.33
NUP43-201ENST00000340413 FHL5Q5TD97 284 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 CDCP2Q5VXM1 449 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 HEPHL1Q6MZM0 1159 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 IRGCQ6NXR0 463 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 IGF2-ASQ6U949 168 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 CBLL1Q75N03 491 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 ERMP1Q7Z2K6 904 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 SVOPLQ8N434 492 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 PLPP5Q8NEB5 264 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 WDR60Q8WVS4 1066 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 PATE1Q8WXA2 126 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 ZNF501Q96CX3 271 aaPredicted RBP6.76□□□□□ -1.33
NUP43-201ENST00000340413 BTBD9Q96Q07 612 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 MAP3K3Q99759 626 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 LMF2Q9BU23 707 aaKnown RBP6.76□□□□□ -1.33
NUP43-201ENST00000340413 GABARAPL1Q9H0R8 117 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 WDR54Q9H977 334 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 THSD1Q9NS62 852 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 A0A0G2JPF8 293 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 HNRNPCL2B2RXH8 293 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 HNRNPCL3B7ZW38 293 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 SYT5O00445 386 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 CXCR6O00574 342 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 HNRNPCL4P0DMR1 293 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 ENDOUP21128 410 aaKnown RBP6.76□□□□□ -1.33
NUP43-201ENST00000340413 MAP3K8P41279 467 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 DCAF7P61962 342 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 MC2RQ01718 297 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 SF3A3Q12874 501 aaKnown RBP eCLIP6.76□□□□□ -1.33
NUP43-201ENST00000340413 EPS8Q12929 822 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 ZNF628Q5EBL2 1059 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 ADNP2Q6IQ32 1131 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 TSSK4Q6SA08 328 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 LIN37Q96GY3 246 aaPredicted RBP6.76□□□□□ -1.33
NUP43-201ENST00000340413 EGLN2Q96KS0 407 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 BBS4Q96RK4 519 aa6.76□□□□□ -1.33
NUP43-201ENST00000340413 HBEGFQ99075 208 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms