RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 DHRS7Q9Y394 339 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 CHST2Q9Y4C5 530 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 PLEKHM1Q9Y4G2 1056 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 TRIP11Q15643 1979 aa9.23□□□□□ -0.93
PTCHD4-201ENST00000339488 LOC390937A0A1W2PQ73 354 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ERI2A8K979 691 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 I6L893 689 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 CLDN4O14493 209 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 CA12O43570 354 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 KHDRBS3O75525 346 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 NTSR2O95665 410 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ZDHHC11BP0C7U3 371 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 C6P13671 934 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF8P17098 575 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 PTPN6P29350 595 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 SLC6A1P30531 599 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 BTCP35070 178 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 GNG10P50151 68 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 OC90Q02509 493 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 INSL4Q14641 139 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 TGIF1Q15583 401 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 NTRK2Q16620 822 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 PLA1AQ53H76 456 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 KANK2Q63ZY3 851 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 RTL10Q7L3V2 364 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 HSD17B13Q7Z5P4 300 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 RAB44Q7Z6P3 723 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ANKRD46Q86W74 232 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 FAM131BQ86XD5 332 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 DCUN1D3Q8IWE4 304 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 PDZD9Q8IXQ8 264 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 PLA2G15Q8NCC3 412 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 SENP5Q96HI0 755 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 PYURFQ96I23 114 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 IL4I1Q96RQ9 567 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF670Q9BS34 389 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ATG101Q9BSB4 218 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 NIF3L1Q9GZT8 377 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 XYLT2Q9H1B5 865 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 MVB12BQ9H7P6 319 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 GORASP2Q9H8Y8 452 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 RGS18Q9NS28 235 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 TXNL4BQ9NX01 149 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 SLC25A37Q9NYZ2 338 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 MARK1Q9P0L2 795 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 NFKBIL1Q9UBC1 381 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 POLR3HQ9Y535 204 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 NINQ8N4C6 2090 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 MEIKINA0A087WXM9 373 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 CDC7O00311 574 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 VPS4BO75351 444 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 CSO75390 466 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 S100A8P05109 93 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 PSMA1P25786 263 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 GIFP27352 417 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 CSF2RBP32927 897 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 PTGR1Q14914 329 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 TMEM132BQ14DG7 1078 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF628Q5EBL2 1059 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 COQ5Q5HYK3 327 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 C19orf48Q6RUI8 117 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 LRRN1Q6UXK5 716 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 SSX6Q7RTT6 188 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ZFAND4Q86XD8 727 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 MSRB3Q8IXL7 192 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 IL31RAQ8NI17 732 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 HMGB4Q8WW32 186 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 HGDQ93099 445 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 MISP3Q96FF7 219 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 MSLNLQ96KJ4 702 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 AMDHD1Q96NU7 426 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 SMAD5Q99717 465 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 PPP1R14DQ9NXH3 145 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 STUB1Q9UNE7 303 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ERVW-1Q9UQF0 538 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 IGKV6D-41A0A0C4DH26 115 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 FPGTO14772 594 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ADAM12O43184 909 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 EEF1E1O43324 174 aaKnown RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 SOX15O60248 233 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 NFKB1P19838 968 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 TNFRSF1BP20333 461 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 GCGRP47871 477 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 NPBWR1P48145 328 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 CACNB2Q08289 660 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 MBTPS1Q14703 1052 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 HLXQ14774 488 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF699Q32M78 642 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 NKAIN4Q8IVV8 208 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF248Q8NDW4 579 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 CCDC54Q8NEL0 328 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ARMC5Q96C12 935 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 PITX2Q99697 317 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 KATNB1Q9BVA0 655 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 PRO1933Q9H354 126 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ACTL8Q9H568 366 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 ZNF334Q9HCZ1 680 aaPredicted RBP9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 SLC6A20Q9NP91 592 aa9.22□□□□□ -0.93
PTCHD4-201ENST00000339488 SCP2D1Q9UJQ7 156 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms