RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 WDFY2Q96P53 400 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 FRG2BQ96QU4 278 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 ASPNQ9BXN1 380 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 PLA2G2FQ9BZM2 168 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 GIMAP4Q9NUV9 329 aa17.9■□□□□ 0.46
PSPC1-201ENST00000338910 M0R129 80 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 TNFRSF11BO00300 401 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 LZTS3O60299 673 aaPredicted RBP17.89■□□□□ 0.45
PSPC1-201ENST00000338910 MLLT3P42568 568 aaPredicted RBP17.89■□□□□ 0.45
PSPC1-201ENST00000338910 ASAH1Q13510 395 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 ELAVL3Q14576 367 aaKnown RBP17.89■□□□□ 0.45
PSPC1-201ENST00000338910 PDGFRLQ15198 375 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 TAB1Q15750 504 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 XKR6Q5GH73 641 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 RAET1GQ6H3X3 334 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 AGTRAPQ6RW13 159 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 KRT73Q86Y46 540 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 RASGRP3Q8IV61 690 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 PEX5LQ8IYB4 626 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 CFAP206Q8IYR0 622 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 ELMOD2Q8IZ81 293 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 CACTIN-AS1Q8N1I8 211 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 TMIEQ8NEW7 156 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 OR10G2Q8NGC3 310 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 UTP15Q8TED0 518 aaKnown RBP17.89■□□□□ 0.45
PSPC1-201ENST00000338910 SLC22A4Q9H015 551 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 GULP1Q9UBP9 304 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 POFUT2Q9Y2G5 429 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 A0A0B4J293 547 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 LINC00854A0A1B0GVQ3 168 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 MAGEB17A8MXT2 336 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 SCN2BO60939 215 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 SLC16A8O95907 504 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 C6P13671 934 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 ADRB3P13945 408 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 CD22P20273 847 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 GPR1P46091 355 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 HYAL1Q12794 435 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 ZNF621Q6ZSS3 439 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 TRAPPC5Q8IUR0 188 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 RDH10Q8IZV5 341 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 COQ8BQ96D53 544 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 MRPL38Q96DV4 380 aaKnown RBP17.89■□□□□ 0.45
PSPC1-201ENST00000338910 RNF31Q96EP0 1072 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 APOLD1Q96LR9 279 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 NIPSNAP1Q9BPW8 284 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 BEX2Q9BXY8 128 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 TIGARQ9NQ88 270 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 OBP2AQ9NY56 170 aa17.89■□□□□ 0.45
PSPC1-201ENST00000338910 STOX2Q9P2F5 926 aaPredicted RBP17.89■□□□□ 0.45
PSPC1-201ENST00000338910 E7EQ34 232 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 SUV39H1O43463 412 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 CATP04040 527 aaKnown RBP17.88■□□□□ 0.45
PSPC1-201ENST00000338910 ALPPP05187 535 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 PRPH2P23942 346 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 OPRD1P41143 372 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 WNT3P56703 355 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 PSPHP78330 225 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 SCN1BQ07699 218 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 DDX39BQ13838 428 aaKnown RBP17.88■□□□□ 0.45
PSPC1-201ENST00000338910 LIX1LQ8IVB5 337 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 NUS1Q96E22 293 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 MTERF1Q99551 399 aaKnown RBP17.88■□□□□ 0.45
PSPC1-201ENST00000338910 PKP4Q99569 1192 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 CNPPD1Q9BV87 410 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 IMPAD1Q9NX62 359 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 NDUFAF4Q9P032 175 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 SLC6A14Q9UN76 642 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 SNX7Q9UNH6 387 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 DUSP12Q9UNI6 340 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 CCDC182A6NF36 153 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 B4DXG7 233 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 ANXA8P13928 327 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 JUPP14923 745 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 MAPK1P28482 360 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 GJA4P35212 333 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 CD83Q01151 205 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.88■□□□□ 0.45
PSPC1-201ENST00000338910 FCHO2Q0JRZ9 810 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 RUNX3Q13761 415 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 NLRP8Q86W28 1048 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 VWA5B2Q8N398 1253 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 FAM181AQ8N9Y4 354 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 ZFAND1Q8TCF1 268 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 CMTM7Q96FZ5 175 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 OPALINQ96PE5 141 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 TMEM245Q9H330 911 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 PRM3Q9NNZ6 103 aa17.88■□□□□ 0.45
PSPC1-201ENST00000338910 ZSCAN5BA6NJL1 495 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 H3BM21 787 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 ADAMDEC1O15204 470 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 ZNF780AO75290 641 aaPredicted RBP17.87■□□□□ 0.45
PSPC1-201ENST00000338910 NUDT7P0C024 238 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 DOC2AQ14183 400 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 CACUL1Q86Y37 369 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 LMNTD1Q8N9Z9 388 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 OR4C15Q8NGM1 316 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 VANGL1Q8TAA9 524 aaPredicted RBP17.87■□□□□ 0.45
PSPC1-201ENST00000338910 FOPNLQ96NB1 174 aa17.87■□□□□ 0.45
PSPC1-201ENST00000338910 OR4K3Q96R72 315 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms