RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 FGF21Q9NSA1 209 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CUTCQ9NTM9 273 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 HCN3Q9P1Z3 774 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SERTAD3Q9UJW9 196 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PSME2Q9UL46 239 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ENTPD4Q9Y227 616 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SNX8Q9Y5X2 465 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 MYO1GB0I1T2 1018 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FAM227AF5H4B4 570 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NTN3O00634 580 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 MSL3P1P0C860 447 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ACP1P24666 158 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NCBP2P52298 156 aaKnown RBP eCLIP13.91□□□□□ -0.186e-7■■■■□ 23.5
CDK5RAP3-201ENST00000338399 EMP3P54852 163 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ITGA1P56199 1179 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 RAB38P57729 211 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FAM214AQ32MH5 1076 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR52E8Q6IFG1 317 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CYP2R1Q6VVX0 501 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TTLL10Q6ZVT0 673 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 DHFR2Q86XF0 187 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR4N5Q8IXE1 308 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CCDC116Q8IYX3 515 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GPR135Q8IZ08 494 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TMEM52Q8NDY8 209 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SLC26A7Q8TE54 656 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 STMN2Q93045 179 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FAM120BQ96EK7 910 aaKnown RBP13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 FANCEQ9HB96 536 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 TMEM9BQ9NQ34 198 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SEMA4GQ9NTN9 838 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GIMAP4Q9NUV9 329 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ACSL6Q9UKU0 697 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 AP3M1Q9Y2T2 418 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZNF780BQ9Y6R6 833 aa13.91□□□□□ -0.18
CDK5RAP3-201ENST00000338399 D6RAR5 112 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CYR61O00622 381 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 KRT36O76013 467 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PSMG1O95456 288 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NCK1P16333 377 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GPX2P18283 190 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CSNK2A2P19784 350 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 HTR1EP28566 365 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PTGER1P34995 402 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 AVPR1BP47901 424 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CDK9P50750 372 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 GZMMP51124 257 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 MAT1AQ00266 395 aaKnown RBP13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 MLC1Q15049 377 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 CLPPQ16740 277 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PHF19Q5T6S3 580 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NIPAL1Q6NVV3 410 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ANGPTL8Q6UXH0 198 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SLITRK4Q8IW52 837 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR2T12Q8NG77 320 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 OR4K14Q8NGD5 310 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SUN3Q8TAQ9 357 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ZNF681Q96N22 645 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 NEUROD4Q9HD90 331 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 ENAMQ9NRM1 1142 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 SIRT3Q9NTG7 399 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 BCAP29Q9UHQ4 241 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 PCDHB3Q9Y5E6 796 aa13.9□□□□□ -0.18
CDK5RAP3-201ENST00000338399 H0Y3Z8 333 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 LDB3O75112 727 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 STAMBPO95630 424 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GP1BAP07359 652 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ALAS2P22557 587 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 UQCRC2P22695 453 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PPIBP23284 216 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GPC1P35052 558 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CHI3L1P36222 383 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CASP9P55211 416 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ACY1Q03154 408 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ABHD18Q0P651 414 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CEBPEQ15744 281 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 SYT16Q17RD7 645 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TLDC1Q6P9B6 456 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 GPR155Q7Z3F1 870 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 CALHM3Q86XJ0 350 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PTRH1Q86Y79 214 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 NAXDQ8IW45 347 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ZFP28Q8NHY6 868 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 JADE3Q92613 823 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PEX11GQ96HA9 241 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 PRRX2Q99811 253 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TMEM121BQ9BXQ6 578 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FAM86C1Q9NVL1 165 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 DHCR7Q9UBM7 475 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 NDOR1Q9UHB4 597 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 TMEM184BQ9Y519 407 aaPredicted RBP13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ARPC2O15144 300 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ZNF749O43361 778 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 RNH1P13489 461 aaKnown RBP13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ATP6V1B2P21281 511 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 MPIP34949 423 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 XKP51811 444 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 ID2Q02363 134 aa13.89□□□□□ -0.19
CDK5RAP3-201ENST00000338399 FOLH1Q04609 750 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms