RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 CDH7Q9ULB5 785 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 NTNG1Q9Y2I2 539 aa8.4□□□□□ -1.06
SNCA-201ENST00000336904 MUC22E2RYF6 1773 aaPredicted RBP8.4□□□□□ -1.06
SNCA-201ENST00000336904 LRRTM2O43300 516 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 UGT2B11O75310 529 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 JRKO75564 520 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 KLF8O95600 359 aaPredicted RBP8.4□□□□□ -1.07
SNCA-201ENST00000336904 EIF2S1P05198 315 aaKnown RBP8.4□□□□□ -1.07
SNCA-201ENST00000336904 DDCP20711 480 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 PEBP1P30086 187 aaKnown RBP8.4□□□□□ -1.07
SNCA-201ENST00000336904 IDUAP35475 653 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 LIPAP38571 399 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 CTSKP43235 329 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 CCR3P51677 355 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 PHEXP78562 749 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 PDE7AQ13946 482 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 LCTLQ6UWM7 567 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 MSANTD1Q6ZTZ1 278 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 UTS2BQ765I0 119 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 OR52E4Q8NGH9 312 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 PHOSPHO2Q8TCD6 241 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 ZNF514Q96K75 400 aaPredicted RBP8.4□□□□□ -1.07
SNCA-201ENST00000336904 APOL4Q9BPW4 351 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 COPS4Q9BT78 406 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 SLC17A9Q9BYT1 436 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 EHD1Q9H4M9 534 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 EPHX3Q9H6B9 360 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 MVB12BQ9H7P6 319 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 SIRT3Q9NTG7 399 aaPredicted RBP8.4□□□□□ -1.07
SNCA-201ENST00000336904 ZCCHC3Q9NUD5 404 aaKnown RBP8.4□□□□□ -1.07
SNCA-201ENST00000336904 IL20RAQ9UHF4 553 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 ICKQ9UPZ9 632 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 FAM32AQ9Y421 112 aaKnown RBP8.4□□□□□ -1.07
SNCA-201ENST00000336904 PCDHGB3Q9Y5G1 929 aa8.4□□□□□ -1.07
SNCA-201ENST00000336904 NUP210Q8TEM1 1887 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 C17orf113A0A1B0GUU1 675 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 SERTM1A2A2V5 107 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 SMIM30A4D0T7 59 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 CLDN24A6NM45 220 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 H3BN98 237 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 HMGN4O00479 90 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 KMOO15229 486 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 CAPN5O15484 640 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 RGS10O43665 173 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 HYAL3O43820 417 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 ADAM23O75077 832 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 ITGAMP11215 1152 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 PVRP15151 417 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 GRK5P34947 590 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 MAGEA10P43363 369 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 CCT3P49368 545 aaKnown RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 MLLT1Q03111 559 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 HYAL1Q12794 435 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 SLAMF1Q13291 335 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 LRRC32Q14392 662 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 C11orf91Q3C1V1 193 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 FAM46CQ5VWP2 391 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 ADAMTSL4Q6UY14 1074 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 TMCO5AQ8N6Q1 288 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 ABHD11Q8NFV4 315 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 SMPDL3AQ92484 453 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 LINC00615Q96LM1 132 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 HDAC8Q9BY41 377 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 OR51I1Q9H343 314 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 GLIPR2Q9H4G4 154 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 NMNAT1Q9HAN9 279 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 MRPS30Q9NP92 439 aaKnown RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 STARD5Q9NSY2 213 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 ACER3Q9NUN7 267 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 SCN3BQ9NY72 215 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 DNAJC27Q9NZQ0 273 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 PSME2Q9UL46 239 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 DUSP12Q9UNI6 340 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 AP3M1Q9Y2T2 418 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 CXorf51AA0A1B0GTR3 108 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 OR10H3O60404 316 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 RASGRP1O95267 797 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 NADKO95544 446 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 CKMT1AP12532 417 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 HOXB2P14652 356 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 IL1RNP18510 177 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 TNNI3P19429 210 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 BUD31P41223 144 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 EEF1A2Q05639 463 aaKnown RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 NR1D2Q14995 579 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 FAHD1Q6P587 224 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 UNC5DQ6UXZ4 953 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 ZNF765Q7L2R6 523 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 UBE2Q1Q7Z7E8 422 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 DEFB119Q8N690 84 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 LZICQ8WZA0 190 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 MAGEB10Q96LZ2 347 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 ALPK1Q96QP1 1244 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 TMEM168Q9H0V1 697 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 RSPH9Q9H1X1 276 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 ACOT13Q9NPJ3 140 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 PHPT1Q9NRX4 125 aaPredicted RBP8.39□□□□□ -1.07
SNCA-201ENST00000336904 IMPAD1Q9NX62 359 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 MS4A12Q9NXJ0 267 aa8.39□□□□□ -1.07
SNCA-201ENST00000336904 ZNF226Q9NYT6 803 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms