RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 GSRP00390 522 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 KCNJ5P48544 419 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 ARHGAP1Q07960 439 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 PMS2P3Q13401 168 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 UGT2A3Q6UWM9 527 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 Q6ZVU0 165 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 FTMTQ8N4E7 242 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 ZNF283Q8N7M2 679 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 ARNTL2Q8WYA1 636 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 DPCDQ9BVM2 203 aaPredicted RBP12.58□□□□□ -0.4
HLCS-201ENST00000336648 COPZ2Q9P299 210 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 EXTL2Q9UBQ6 330 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 KLHL21Q9UJP4 597 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 CPED1A4D0V7 1026 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 WTIPA6NIX2 430 aaPredicted RBP12.58□□□□□ -0.4
HLCS-201ENST00000336648 OIP5O43482 229 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 ACVRL1P37023 503 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 CDH15P55291 814 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 HNRNPA0Q13151 305 aaKnown RBP12.58□□□□□ -0.4
HLCS-201ENST00000336648 LRRC37A5PQ49AS3 106 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 HAVCR2Q8TDQ0 301 aa12.58□□□□□ -0.4
HLCS-201ENST00000336648 SLC22A31A6NKX4 558 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 FBP2O00757 339 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 EMC8O43402 210 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 CNTN5O94779 1100 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 CD3GP09693 182 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 DNASE1P24855 282 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 RIN1Q13671 783 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 LASP1Q14847 261 aaKnown RBP12.57□□□□□ -0.4
HLCS-201ENST00000336648 ZNF423Q2M1K9 1284 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 MAPK15Q8TD08 544 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 SETD7Q8WTS6 366 aaKnown RBP12.57□□□□□ -0.4
HLCS-201ENST00000336648 ZDHHC12Q96GR4 267 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 MROQ9BYG7 248 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 TAS2R8Q9NYW2 309 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 OARD1Q9Y530 152 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 SOX1O00570 391 aaPredicted RBP12.57□□□□□ -0.4
HLCS-201ENST00000336648 CH25HO95992 272 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 CFIP05156 583 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 CTHP32929 405 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 CAMLGP49069 296 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 ARSJQ5FYB0 599 aaPredicted RBP12.57□□□□□ -0.4
HLCS-201ENST00000336648 DCAF12L1Q5VU92 463 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 TRAM1L1Q8N609 369 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 LDAHQ9H6V9 325 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 MVB12BQ9H7P6 319 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 DNAJC27Q9NZQ0 273 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 ERVK-18Q9QC07 812 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 MROH2AA6NES4 1674 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 FUT4P22083 530 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 IDH3GP51553 393 aaPredicted RBP12.57□□□□□ -0.4
HLCS-201ENST00000336648 CTC1Q2NKJ3 1217 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 LRRC73Q5JTD7 316 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 IRF7Q92985 503 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 KIAA1143Q96AT1 154 aaPredicted RBP12.57□□□□□ -0.4
HLCS-201ENST00000336648 OR51B5Q9H339 312 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 MTG2Q9H4K7 406 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 ARHGEF15O94989 841 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 TBX18O95935 607 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 H2BFMP0C1H6 154 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 LEPRP48357 1165 aaKnown RBP12.57□□□□□ -0.4
HLCS-201ENST00000336648 DHPSP49366 369 aaPredicted RBP12.57□□□□□ -0.4
HLCS-201ENST00000336648 FLYWCH1Q4VC44 716 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 NKAPLQ5M9Q1 402 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 OR4E2Q8NGC2 313 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 OR8S1Q8NH09 359 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 CAPNS2Q96L46 248 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 PRTFDC1Q9NRG1 225 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 GKN1Q9NS71 199 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 CCM2LQ9NUG4 571 aaPredicted RBP12.57□□□□□ -0.4
HLCS-201ENST00000336648 DZANK1Q9NVP4 752 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 SLC2A6Q9UGQ3 507 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 DHDHQ9UQ10 334 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 RIMS1Q86UR5 1692 aaKnown RBP12.57□□□□□ -0.4
HLCS-201ENST00000336648 TMEM233B4DJY2 109 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 C1GALT1C1LP0DN25 315 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 DRD2P14416 443 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 CAPN3P20807 821 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 MAP2K3P46734 347 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 NFATC2Q13469 925 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 C2orf27AQ580R0 203 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 PHF19Q5T6S3 580 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 CYS1Q717R9 158 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 PIM3Q86V86 326 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 ESX1Q8N693 406 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 DNAAF1Q8NEP3 725 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 OR6N2Q8NGY6 317 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 NEIL3Q8TAT5 605 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 SIGLEC10Q96LC7 697 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 HERC2P3Q9BVR0 1158 aa12.57□□□□□ -0.4
HLCS-201ENST00000336648 CNOT11Q9UKZ1 510 aaKnown RBP12.57□□□□□ -0.4
HLCS-201ENST00000336648 FHP07954 510 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 RING1Q06587 406 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 ELOCQ15369 112 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 ITPRIPL2Q3MIP1 535 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 NOXRED1Q6NXP6 359 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 ARHGAP11AQ6P4F7 1023 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 CNTNAP3BQ96NU0 1288 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 CCDC32Q9BV29 185 aa12.56□□□□□ -0.4
HLCS-201ENST00000336648 NSUN3Q9H649 340 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms