RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SLC35C2Q9NQQ7 365 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 ATAD3AQ9NVI7 634 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 MAP10Q9P2G4 905 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 WASF3Q9UPY6 502 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 CLDN16Q9Y5I7 305 aa20.24■□□□□ 0.83
TPM1-204ENST00000334895 NCOR2Q9Y618 2525 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 IGLV3-12A0A075B6K2 115 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 TGFBR3LH3BV60 316 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 ANGPT2O15123 496 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 B4GALT2O60909 372 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 LDB3O75112 727 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 TNFSF15O95150 251 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 BMP10O95393 424 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 ESRRAP11474 423 aaPredicted RBP20.23■□□□□ 0.83
TPM1-204ENST00000334895 CALB2P22676 271 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 FRKP42685 505 aaPredicted RBP20.23■□□□□ 0.83
TPM1-204ENST00000334895 EFNA3P52797 238 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 PCBP4P57723 403 aaKnown RBP20.23■□□□□ 0.83
TPM1-204ENST00000334895 ZNF517Q6ZMY9 492 aaPredicted RBP20.23■□□□□ 0.83
TPM1-204ENST00000334895 TMEM151BQ8IW70 566 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 CLECL1Q8IZS7 167 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 ANKRD9Q96BM1 317 aaPredicted RBP20.23■□□□□ 0.83
TPM1-204ENST00000334895 MIEF2Q96C03 454 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 OR1F2PQ96R84 312 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 SCNM1Q9BWG6 230 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 FAM120CQ9NX05 1096 aaKnown RBP20.23■□□□□ 0.83
TPM1-204ENST00000334895 KLK13Q9UKR3 277 aa20.23■□□□□ 0.83
TPM1-204ENST00000334895 BBIP1A8MTZ0 92 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 CNOT3O75175 753 aaKnown RBP20.22■□□□□ 0.83
TPM1-204ENST00000334895 ERAL1O75616 437 aaKnown RBP20.22■□□□□ 0.83
TPM1-204ENST00000334895 C8orf89P0DMQ9 161 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 FOXL2P58012 376 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 GABREP78334 506 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 BTG2P78543 158 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 ID2Q02363 134 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 FOLH1Q04609 750 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 STX5Q13190 355 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 CEBPEQ15744 281 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 COQ5Q5HYK3 327 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 MSANTD1Q6ZTZ1 278 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 TIPARPQ7Z3E1 657 aaKnown RBP20.22■□□□□ 0.83
TPM1-204ENST00000334895 ZNF595Q8IYB9 648 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 GTF2H4Q92759 462 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 TANKQ92844 425 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 INPP5KQ9BT40 448 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 POLR1BQ9H9Y6 1135 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 MKKSQ9NPJ1 570 aaPredicted RBP20.22■□□□□ 0.83
TPM1-204ENST00000334895 SLAMF8Q9P0V8 285 aa20.22■□□□□ 0.83
TPM1-204ENST00000334895 LEF1Q9UJU2 399 aaPredicted RBP20.22■□□□□ 0.83
TPM1-204ENST00000334895 RNASET2O00584 256 aaKnown RBP20.21■□□□□ 0.83
TPM1-204ENST00000334895 MRASO14807 208 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 AIM2O14862 343 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 PDPK1O15530 556 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 PLIN5Q00G26 463 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 MAPKAPK3Q16644 382 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 FAM199XQ6PEV8 388 aaPredicted RBP20.21■□□□□ 0.83
TPM1-204ENST00000334895 FAM198BQ6UWH4 519 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 CCDC121Q6ZUS5 278 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 OVCH1Q7RTY7 1134 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 SCUBE1Q8IWY4 988 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 DPP10Q8N608 796 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 SUN3Q8TAQ9 357 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 TGIF2Q9GZN2 237 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 CHST8Q9H2A9 424 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 ZNF282Q9UDV7 671 aaPredicted RBP20.21■□□□□ 0.83
TPM1-204ENST00000334895 MRPS33Q9Y291 106 aaKnown RBP20.21■□□□□ 0.83
TPM1-204ENST00000334895 NUP214P35658 2090 aaPredicted RBP20.21■□□□□ 0.83
TPM1-204ENST00000334895 CCDC88CQ9P219 2028 aa20.21■□□□□ 0.83
TPM1-204ENST00000334895 PRSS51A0A1B0GVH4 220 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 MYO1GB0I1T2 1018 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 UNC5CO95185 931 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 IL10P22301 178 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 FEN1P39748 380 aaKnown RBP20.2■□□□□ 0.82
TPM1-204ENST00000334895 MMEL1Q495T6 779 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 TMEM164Q5U3C3 297 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 MRPL14Q6P1L8 145 aaKnown RBP20.2■□□□□ 0.82
TPM1-204ENST00000334895 LAPTM4BQ86VI4 370 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 OR4K14Q8NGD5 310 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 STT3BQ8TCJ2 826 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 MR1Q95460 341 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 CCDC115Q96NT0 180 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 SLC46A1Q96NT5 459 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 DPH2Q9BQC3 489 aaPredicted RBP20.2■□□□□ 0.82
TPM1-204ENST00000334895 TUBB6Q9BUF5 446 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 PRTFDC1Q9NRG1 225 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 SLC6A13Q9NSD5 602 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 IFT80Q9P2H3 777 aaPredicted RBP20.2■□□□□ 0.82
TPM1-204ENST00000334895 MAN2B2Q9Y2E5 1009 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 MYOCOSA0A1B0GUC4 107 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 BLACEA4D250 179 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 CTNSO60931 367 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 GPR75O95800 540 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 C6orf47O95873 294 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 KLK3P07288 261 aaPredicted RBP20.2■□□□□ 0.82
TPM1-204ENST00000334895 MAOAP21397 527 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 AGXTP21549 392 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 PTPN6P29350 595 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 CDKN2CP42773 168 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 XKP51811 444 aa20.2■□□□□ 0.82
TPM1-204ENST00000334895 CAMK2BQ13554 666 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms