RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 VASH2Q86V25 355 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 CACTIN-AS1Q8N1I8 211 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 MIER2Q8N344 545 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 CPSF7Q8N684 471 aaKnown RBP15.52■□□□□ 0.07
SHOX-201ENST00000334060 ASPSCR1Q9BZE9 553 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 VN1R1Q9GZP7 353 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 SH3BP4Q9P0V3 963 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 IL17BQ9UHF5 180 aa15.52■□□□□ 0.07
SHOX-201ENST00000334060 CAPN14A8MX76 684 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 HRKO00198 91 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 FBP2O00757 339 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 SCN2BO60939 215 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 SLC22A3O75751 556 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 KLF7O75840 302 aaPredicted RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 ZGLP1P0C6A0 271 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 PRPS2P11908 318 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 COX7A2P14406 83 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 WT1P19544 449 aaPredicted RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 DDCP20711 480 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 TSFMP43897 325 aaKnown RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 PDE7AQ13946 482 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 SQLEQ14534 574 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 RPS6KA2Q15349 733 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 GTDC1Q4AE62 458 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 PAGE3Q5JUK9 113 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 SLC48A1Q6P1K1 146 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 SLC2A7Q6PXP3 512 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 C6orf15Q6UXA7 325 aaPredicted RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 DNAJC14Q6Y2X3 702 aaPredicted RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 ENDOVQ8N8Q3 282 aaKnown RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 SUN3Q8TAQ9 357 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 TBC1D20Q96BZ9 403 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 C8orf44Q96CB5 159 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 INPP5KQ9BT40 448 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 REEP4Q9H6H4 257 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 LYRM4Q9HD34 91 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 PFDN4Q9NQP4 134 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 NUP214P35658 2090 aaPredicted RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 NVLO15381 856 aaKnown RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 ALOX12BO75342 701 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 UMODP07911 640 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 RNH1P13489 461 aaKnown RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 NQO1P15559 274 aaKnown RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 JAK1P23458 1154 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 CDKN2CP42773 168 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 MAD2L1Q13257 205 aaPredicted RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 GSTA3Q16772 222 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 PRMT9Q6P2P2 845 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 ZNF551Q7Z340 670 aaPredicted RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 SNX32Q86XE0 403 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 ADCY4Q8NFM4 1077 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 ZFAND2BQ8WV99 257 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 STON2Q8WXE9 905 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 KLHL29Q96CT2 875 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 MVB12AQ96EY5 273 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 RAB3IPQ96QF0 476 aaPredicted RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 TRIM4Q9C037 500 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 LYARQ9NX58 379 aaKnown RBP15.51■□□□□ 0.07
SHOX-201ENST00000334060 CROTQ9UKG9 612 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 UTS2RQ9UKP6 389 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 MKL2Q9ULH7 1088 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 APC2O95996 2303 aa15.51■□□□□ 0.07
SHOX-201ENST00000334060 A8MUA0 341 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 RAD1O60671 282 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 ATP5HO75947 161 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 RPSAP08865 295 aaKnown RBP15.5■□□□□ 0.07
SHOX-201ENST00000334060 TCN2P20062 427 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 RHAGQ02094 409 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 SMU1Q2TAY7 513 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 ATP1A1-AS1Q5TC04 95 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 OVCH1Q7RTY7 1134 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 BPHLQ86WA6 291 aaPredicted RBP15.5■□□□□ 0.07
SHOX-201ENST00000334060 RNF217Q8TC41 542 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 ZNF681Q96N22 645 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 NPAS2Q99743 824 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 SLC24A3Q9HC58 644 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 ZNF282Q9UDV7 671 aaPredicted RBP15.5■□□□□ 0.07
SHOX-201ENST00000334060 NEUROG3Q9Y4Z2 214 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 MGAQ8IWI9 3026 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 NUP210LQ5VU65 1888 aa15.5■□□□□ 0.07
SHOX-201ENST00000334060 IGLV3-12A0A075B6K2 115 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 MED19A0JLT2 244 aaPredicted RBP15.49■□□□□ 0.07
SHOX-201ENST00000334060 A6NHS1 94 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 TERTO14746 1132 aaKnown RBP15.49■□□□□ 0.07
SHOX-201ENST00000334060 TLX3O43711 291 aaPredicted RBP15.49■□□□□ 0.07
SHOX-201ENST00000334060 CT62P0C5K7 136 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 ACPPP15309 386 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 MAPK1P28482 360 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 RBMS1P29558 406 aaKnown RBP15.49■□□□□ 0.07
SHOX-201ENST00000334060 POLR2JP52435 117 aaKnown RBP15.49■□□□□ 0.07
SHOX-201ENST00000334060 ARFIP1P53367 373 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 MRPS35P82673 323 aaKnown RBP15.49■□□□□ 0.07
SHOX-201ENST00000334060 METTL21CQ5VZV1 264 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 BLOC1S3Q6QNY0 202 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 CCDC116Q8IYX3 515 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 NKD1Q969G9 470 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 METTL2AQ96IZ6 378 aaKnown RBP15.49■□□□□ 0.07
SHOX-201ENST00000334060 LRRC37BQ96QE4 947 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 SLC39A3Q9BRY0 314 aa15.49■□□□□ 0.07
SHOX-201ENST00000334060 ROGDIQ9GZN7 287 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms