RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 CCDC116Q8IYX3 515 aa16.92■□□□□ 0.3
ACTB-201ENST00000331789 SPEM1Q8N4L4 309 aa16.92■□□□□ 0.3
ACTB-201ENST00000331789 BAHD1Q8TBE0 780 aaPredicted RBP16.92■□□□□ 0.3
ACTB-201ENST00000331789 RSC1A1Q92681 617 aa16.92■□□□□ 0.3
ACTB-201ENST00000331789 SMIM10Q96HG1 83 aa16.92■□□□□ 0.3
ACTB-201ENST00000331789 MAGED4Q96JG8 741 aa16.92■□□□□ 0.3
ACTB-201ENST00000331789 RBM4BQ9BQ04 359 aaKnown RBP16.92■□□□□ 0.3
ACTB-201ENST00000331789 RBM4Q9BWF3 364 aaKnown RBP16.92■□□□□ 0.3
ACTB-201ENST00000331789 TOR3AQ9H497 397 aa16.92■□□□□ 0.3
ACTB-201ENST00000331789 SERHL2Q9H4I8 314 aa16.92■□□□□ 0.3
ACTB-201ENST00000331789 LYARQ9NX58 379 aaKnown RBP16.92■□□□□ 0.3
ACTB-201ENST00000331789 USE1Q9NZ43 259 aa16.92■□□□□ 0.3
ACTB-201ENST00000331789 ANKMY1Q9P2S6 941 aa16.92■□□□□ 0.3
ACTB-201ENST00000331789 ANGPT4Q9Y264 503 aa16.92■□□□□ 0.3
ACTB-201ENST00000331789 A0A0J9YY10 115 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 H0YGG7 62 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 H3BNH8 94 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 TLR4O00206 839 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 HS6ST1O60243 411 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 H6PDO95479 791 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 FEN1P39748 380 aaKnown RBP16.91■□□□□ 0.3
ACTB-201ENST00000331789 PCBP3P57721 371 aaKnown RBP16.91■□□□□ 0.3
ACTB-201ENST00000331789 ARF3P61204 181 aaPredicted RBP16.91■□□□□ 0.3
ACTB-201ENST00000331789 PUS10Q3MIT2 529 aaKnown RBP16.91■□□□□ 0.3
ACTB-201ENST00000331789 CYP27C1Q4G0S4 372 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 CRB2Q5IJ48 1285 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 RPS26P11Q5JNZ5 115 aaPredicted RBP16.91■□□□□ 0.3
ACTB-201ENST00000331789 GPR153Q6NV75 609 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 SHQ1Q6PI26 577 aaKnown RBP16.91■□□□□ 0.3
ACTB-201ENST00000331789 USP51Q70EK9 711 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 CADM4Q8NFZ8 388 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 SUN3Q8TAQ9 357 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 SPPL2AQ8TCT8 520 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 TBC1D20Q96BZ9 403 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 MBOAT4Q96T53 435 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 ZFYVE21Q9BQ24 234 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 CHRDQ9H2X0 955 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 KLK4Q9Y5K2 254 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 EML5Q05BV3 1969 aa16.91■□□□□ 0.3
ACTB-201ENST00000331789 OR5K3A6NET4 321 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 H0YAE9 185 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 EIF2S1P05198 315 aaKnown RBP16.9■□□□□ 0.3
ACTB-201ENST00000331789 ATP6V1B1P15313 513 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 CLCN2P51788 898 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 ZP2Q05996 745 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 BIRC2Q13490 618 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 RUNX2Q13950 521 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 DEFB134Q4QY38 66 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 REEP3Q6NUK4 255 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 SZRD1Q7Z422 152 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 SLC44A2Q8IWA5 706 aaPredicted RBP16.9■□□□□ 0.3
ACTB-201ENST00000331789 LMX1AQ8TE12 382 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 SLC38A5Q8WUX1 472 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 THAP11Q96EK4 314 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 RMND5BQ96G75 393 aaPredicted RBP16.9■□□□□ 0.3
ACTB-201ENST00000331789 A4GALTQ9NPC4 353 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 RAB23Q9ULC3 237 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 MYRFQ9Y2G1 1151 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 MRPS2Q9Y399 296 aaKnown RBP16.9■□□□□ 0.3
ACTB-201ENST00000331789 PRAMEF25A6NGN4 478 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 HMGN4O00479 90 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 C9P02748 559 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 BCHEP06276 602 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 TFPTP0C1Z6 253 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 NME1P15531 152 aaKnown RBP16.9■□□□□ 0.3
ACTB-201ENST00000331789 OR1E2P47887 323 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 RACK1P63244 317 aaKnown RBP16.9■□□□□ 0.3
ACTB-201ENST00000331789 MAPK11Q15759 364 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 GPR19Q15760 415 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 OOSP2Q86WS3 158 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 GJD3Q8N144 294 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 ARL10Q8N8L6 244 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 SMYD1Q8NB12 490 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 CAMKVQ8NCB2 501 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 PJA1Q8NG27 643 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 ZFP28Q8NHY6 868 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 KLHL6Q8WZ60 621 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 HSPA12BQ96MM6 686 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 MRPS26Q9BYN8 205 aaKnown RBP16.9■□□□□ 0.3
ACTB-201ENST00000331789 TMEM74BQ9NUR3 256 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 IFT80Q9P2H3 777 aaPredicted RBP16.9■□□□□ 0.3
ACTB-201ENST00000331789 THEGQ9P2T0 379 aa16.9■□□□□ 0.3
ACTB-201ENST00000331789 CSNK2A2P19784 350 aaPredicted RBP16.89■□□□□ 0.29
ACTB-201ENST00000331789 BCKDHBP21953 392 aa16.89■□□□□ 0.29
ACTB-201ENST00000331789 DNAJA1P31689 397 aaKnown RBP16.89■□□□□ 0.29
ACTB-201ENST00000331789 PRKAG1P54619 331 aa16.89■□□□□ 0.29
ACTB-201ENST00000331789 ITGA1P56199 1179 aa16.89■□□□□ 0.29
ACTB-201ENST00000331789 APOFQ13790 326 aa16.89■□□□□ 0.29
ACTB-201ENST00000331789 SUZ12Q15022 739 aaKnown RBP16.89■□□□□ 0.29
ACTB-201ENST00000331789 ELOCQ15369 112 aa16.89■□□□□ 0.29
ACTB-201ENST00000331789 IFI44LQ53G44 452 aa16.89■□□□□ 0.29
ACTB-201ENST00000331789 ARMC6Q6NXE6 501 aa16.89■□□□□ 0.29
ACTB-201ENST00000331789 TTC33Q6PID6 262 aaPredicted RBP16.89■□□□□ 0.29
ACTB-201ENST00000331789 PATL1Q86TB9 770 aaKnown RBP16.89■□□□□ 0.29
ACTB-201ENST00000331789 TMEFF1Q8IYR6 380 aa16.89■□□□□ 0.29
ACTB-201ENST00000331789 ZNF786Q8N393 782 aa16.89■□□□□ 0.29
ACTB-201ENST00000331789 RERGQ96A58 199 aaPredicted RBP16.89■□□□□ 0.29
ACTB-201ENST00000331789 CLDN23Q96B33 292 aa16.89■□□□□ 0.29
ACTB-201ENST00000331789 TMEM19Q96HH6 336 aa16.89■□□□□ 0.29
ACTB-201ENST00000331789 SLC35G5Q96KT7 338 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms