RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 MINDY4Q4G0A6 757 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 SFT2D3Q587I9 215 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 TOR1AIP1Q5JTV8 583 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 ACER2Q5QJU3 275 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 GRHL2Q6ISB3 625 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 PAPD4Q6PIY7 484 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 CTAGE6Q86UF2 777 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 CCDC25Q86WR0 208 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 CTAGE4Q8IX94 777 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 GPALPP1Q8IXQ4 340 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 PRSS58Q8IYP2 241 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 CENPLQ8N0S6 344 aaPredicted RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 CA13Q8N1Q1 262 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 MFSD4AQ8N468 514 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 CISD2Q8N5K1 135 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 CEP112Q8N8E3 955 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 MDS2Q8NDY4 140 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 OR8K3Q8NH51 312 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 REPS1Q96D71 796 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 MOCOSQ96EN8 888 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 PEX11GQ96HA9 241 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 FAR2Q96K12 515 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 C16orf45Q96MC5 204 aaPredicted RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 KCNC2Q96PR1 638 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 FMO2Q99518 471 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 TBCDQ9BTW9 1192 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 REXO4Q9GZR2 422 aaKnown RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 CXorf56Q9H5V9 222 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 CAB39LQ9H9S4 337 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 ZBTB20Q9HC78 741 aaPredicted RBP5.93□□□□□ -1.46
SMG1-201ENST00000330588 MS4A12Q9NXJ0 267 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 OPTCQ9UBM4 332 aa5.93□□□□□ -1.46
SMG1-201ENST00000330588 LAMA5O15230 3695 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 ASPDHA6ND91 283 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 H0YIV9 168 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 STX16-NPEPL1H3BU86 382 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 PYCARD-AS1I3L0S3 204 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 MASP2O00187 686 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 FCHO1O14526 889 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 STX16O14662 325 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 ERI3O43414 337 aaKnown RBP5.92□□□□□ -1.46
SMG1-201ENST00000330588 PRAMEF4O60810 478 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 JRKO75564 520 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 KRT38O76015 456 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 SEC24DO94855 1032 aaPredicted RBP5.92□□□□□ -1.46
SMG1-201ENST00000330588 WDPCPO95876 746 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 TBX6O95947 436 aaPredicted RBP5.92□□□□□ -1.46
SMG1-201ENST00000330588 C2P06681 752 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 STSP08842 583 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 EPORP19235 508 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 HNRNPH1P31943 449 aaKnown RBP5.92□□□□□ -1.46
SMG1-201ENST00000330588 GDF5P43026 501 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 HSPA7P48741 367 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 TRPC1P48995 793 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 TDGF1P3P51864 188 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 PGGT1BP53609 377 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 PHEXP78562 749 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 IRF8Q02556 426 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 ACTN3Q08043 901 aaPredicted RBP5.92□□□□□ -1.46
SMG1-201ENST00000330588 DLG1Q12959 904 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 CHIT1Q13231 466 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 SERTAD2Q14140 314 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 DOC2AQ14183 400 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 PRR30Q53SZ7 412 aaPredicted RBP5.92□□□□□ -1.46
SMG1-201ENST00000330588 XKR6Q5GH73 641 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 SFRP5Q5T4F7 317 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 MFSD4BQ5TF39 518 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 PRAMEF9Q5VWM5 478 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 FAAH2Q6GMR7 532 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 MED27Q6P2C8 311 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 MTFR2Q6P444 385 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 ABHD17CQ6PCB6 329 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 VHLLQ6RSH7 139 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 LANCL3Q6ZV70 420 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 RAPH1Q70E73 1250 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 THAP5Q7Z6K1 395 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 ZCCHC7Q8N3Z6 543 aaKnown RBP5.92□□□□□ -1.46
SMG1-201ENST00000330588 SNX31Q8N9S9 440 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 L3MBTL4Q8NA19 623 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 TMEM178AQ8NBL3 297 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 NFAM1Q8NET5 270 aaPredicted RBP5.92□□□□□ -1.46
SMG1-201ENST00000330588 VPS37AQ8NEZ2 397 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 MYRIPQ8NFW9 859 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 OR1N1Q8NGS0 311 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 KIF18AQ8NI77 898 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 GRHL3Q8TE85 626 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 ZNF473Q8WTR7 871 aaKnown RBP5.92□□□□□ -1.46
SMG1-201ENST00000330588 NR4A3Q92570 626 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 RELTQ969Z4 430 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 CMTM7Q96FZ5 175 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 SCMH1Q96GD3 660 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 MACROD1Q9BQ69 325 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 CENPKQ9BS16 269 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 C1QTNF3Q9BXJ4 246 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 MS4A8Q9BY19 250 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 AICDAQ9GZX7 198 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.92□□□□□ -1.46
SMG1-201ENST00000330588 ALG9Q9H6U8 611 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 PPCSQ9HAB8 311 aa5.92□□□□□ -1.46
SMG1-201ENST00000330588 KCNK13Q9HB14 408 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms