RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 ST3GAL4Q11206 333 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 SIX1Q15475 284 aaPredicted RBP13.71□□□□□ -0.22
TRIM25-201ENST00000316881 SFT2D3Q587I9 215 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 TSPEARQ8WU66 669 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 TOX2Q96NM4 488 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 DUSP23Q9BVJ7 150 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 MEAF6Q9HAF1 191 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 PCDHGB6Q9Y5F9 930 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 IGKV6D-21A0A0A0MT36 114 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 PROM1O43490 865 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 PDYNP01213 254 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 ADORA3P0DMS8 318 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 PEPDP12955 493 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 SCGB2B2Q4G0G5 96 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 GTF2IRD2BQ6EKJ0 949 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 ZNF613Q6PF04 617 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 GTF2IRD2Q86UP8 949 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 ZFAND4Q86XD8 727 aa13.71□□□□□ -0.22
TRIM25-201ENST00000316881 LRP8Q14114 963 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 MLC1Q15049 377 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 NNATQ16517 81 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 ODF4Q2M2E3 257 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 C6orf136Q5SQH8 315 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 ZSWIM9Q86XI8 627 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 SHKBP1Q8TBC3 707 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 SCRN2Q96FV2 425 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 PEX11GQ96HA9 241 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 TMED9Q9BVK6 235 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 TRPV4Q9HBA0 871 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 SAGE1Q9NXZ1 904 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 OR7A10O76100 309 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 SEC23BQ15437 767 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 MEDAGQ5VYS4 303 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 C3orf33Q6P1S2 294 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 PAQR7Q86WK9 346 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 WDTC1Q8N5D0 677 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 RADILQ96JH8 1075 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 MAP3K3Q99759 626 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 HOXD1Q9GZZ0 328 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 TEX13DA0A0J9YY54 714 aaPredicted RBP13.7□□□□□ -0.22
TRIM25-201ENST00000316881 POLR1CO15160 346 aaPredicted RBP13.7□□□□□ -0.22
TRIM25-201ENST00000316881 SEC14L5O43304 696 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 BCKDHAP12694 445 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 SRCP12931 536 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 ZNF16P17020 682 aaPredicted RBP13.7□□□□□ -0.22
TRIM25-201ENST00000316881 GRK5P34947 590 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 SLC35F1Q5T1Q4 408 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 OGFOD2Q6N063 350 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 CRTC1Q6UUV9 634 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 CARM1Q86X55 608 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 HHIPQ96QV1 700 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 CCDC106Q9BWC9 280 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 EURLQ9NYK6 297 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 CCDC59Q9P031 241 aaKnown RBP13.7□□□□□ -0.22
TRIM25-201ENST00000316881 EXOSC1Q9Y3B2 195 aaKnown RBP13.7□□□□□ -0.22
TRIM25-201ENST00000316881 SOX14O95416 240 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 ITIH1P19827 911 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 GGT2P36268 569 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 PITX1P78337 314 aaPredicted RBP13.7□□□□□ -0.22
TRIM25-201ENST00000316881 PLD6Q8N2A8 252 aaKnown RBP13.7□□□□□ -0.22
TRIM25-201ENST00000316881 TMEM40Q8WWA1 233 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 NANOS1Q8WY41 292 aaKnown RBP13.7□□□□□ -0.22
TRIM25-201ENST00000316881 TM9SF4Q92544 642 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 ZFYVE21Q9BQ24 234 aa13.7□□□□□ -0.22
TRIM25-201ENST00000316881 SLC22A1O15245 554 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 HOXB9P17482 250 aaPredicted RBP13.69□□□□□ -0.22
TRIM25-201ENST00000316881 DCDC1P59894 354 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 DOC2AQ14183 400 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 MANEALQ5VSG8 457 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 GLT8D1Q68CQ7 371 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 TOMM5Q8N4H5 51 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 OR5T2Q8NGG2 359 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 OR14L1PQ8NHC6 308 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 BIRC7Q96CA5 298 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 TMEM80Q96HE8 168 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 PRR11Q96HE9 360 aaPredicted RBP13.69□□□□□ -0.22
TRIM25-201ENST00000316881 TMEM14AQ9Y6G1 99 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 A0A096LPI6 279 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 CDK10Q15131 360 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 CARD17Q5XLA6 110 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 DNAAF1Q8NEP3 725 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 MROQ9BYG7 248 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 HEMK1Q9Y5R4 338 aaPredicted RBP13.69□□□□□ -0.22
TRIM25-201ENST00000316881 LOC100130705A0A1B0GUX0 176 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 C2orf92A0A1B0GVN3 265 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 SERTAD2Q14140 314 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 PSAPL1Q6NUJ1 521 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 OR9I1Q8NGQ6 314 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 TMEM203Q969S6 136 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 HSPA12BQ96MM6 686 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 CCDC115Q96NT0 180 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 ERMAPQ96PL5 475 aaPredicted RBP13.69□□□□□ -0.22
TRIM25-201ENST00000316881 PHRF1Q9P1Y6 1649 aaKnown RBP13.69□□□□□ -0.22
TRIM25-201ENST00000316881 FEZF1A0PJY2 475 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 E7ESA3 106 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 EIF3FO00303 357 aaPredicted RBP13.69□□□□□ -0.22
TRIM25-201ENST00000316881 RAD51DO75771 328 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 CEBPBP17676 345 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 TMEM107Q6UX40 140 aa13.69□□□□□ -0.22
TRIM25-201ENST00000316881 RPS27LQ71UM5 84 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms