RNA–Protein interactions for RNA: ENST00000316534.8

NPHP1-201, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-201ENST00000316534 FAM118AQ9NWS6 357 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 AURKCQ9UQB9 309 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ATG4BQ9Y4P1 393 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 CLDN16Q9Y5I7 305 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 SMIM31A0A1B0GVY4 71 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 FAM149AA5PLN7 773 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ZNF682O95780 498 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 C9P02748 559 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 THEGLP0DJG4 465 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ETFAP13804 333 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ETS2P15036 469 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 IL9P15248 144 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 GRK3P35626 688 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 CDK9P50750 372 aaKnown RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 DAPP51397 102 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ISL1P61371 349 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 SCARB2Q14108 478 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 SLC9A5Q14940 896 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ZNF628Q5EBL2 1059 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 CD300LDQ6UXZ3 194 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 SLC36A4Q6YBV0 504 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 IFNEQ86WN2 208 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 CACUL1Q86Y37 369 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ARMC8Q8IUR7 673 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 ZDHHC21Q8IVQ6 265 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 HORMAD2Q8N7B1 307 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 CHDHQ8NE62 594 aaPredicted RBP6.78□□□□□ -1.32
NPHP1-201ENST00000316534 GPR32P1Q8NGA4 272 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 HMGB4Q8WW32 186 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 FGF11Q92914 225 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 FAIM2Q9BWQ8 316 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 SRMSQ9H3Y6 488 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 EVA1AQ9H8M9 152 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 PHF11Q9UIL8 331 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 CYP8B1Q9UNU6 501 aa6.78□□□□□ -1.32
NPHP1-201ENST00000316534 RTCAO00442 366 aaKnown RBP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 GSTA4O15217 222 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 SEMA7AO75326 666 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 CST1P01037 141 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 THRBP10828 461 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 KCNJ5P48544 419 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 LIM2P55344 173 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 DSTNP60981 165 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 ILF3Q12906 894 aaKnown RBP eCLIP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 SLAMF1Q13291 335 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 RBM48Q5RL73 367 aaKnown RBP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 CEP68Q76N32 757 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 CYP4Z1Q86W10 505 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 PARP8Q8N3A8 854 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 GANCQ8TET4 914 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 FKBP10Q96AY3 582 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 SLC6A18Q96N87 628 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 ARHGDIGQ99819 225 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 MS4A12Q9NXJ0 267 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 DAPP1Q9UN19 280 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 LYVE1Q9Y5Y7 322 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 PPM1DO15297 605 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 GNAO1P09471 354 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 GABRB1P18505 474 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 ACTR1BP42025 376 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 ACTR1AP61163 376 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 CDK6Q00534 326 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 PUM1Q14671 1186 aaKnown RBP eCLIP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 SHBQ15464 509 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 SKIV2LQ15477 1246 aaKnown RBP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 NRF1Q16656 503 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 THEMIS2Q5TEJ8 643 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 REEP3Q6NUK4 255 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 NIPAL1Q6NVV3 410 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 ZCCHC12Q6PEW1 402 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 FIGLAQ6QHK4 219 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 DNAJC14Q6Y2X3 702 aaPredicted RBP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 RNF130Q86XS8 419 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 SAMD14Q8IZD0 417 aaPredicted RBP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 TSTD1Q8NFU3 115 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 SLC38A5Q8WUX1 472 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 OIT3Q8WWZ8 545 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 HDAC2Q92769 488 aaKnown RBP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 ERLEC1Q96DZ1 483 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 ZNF300Q96RE9 604 aaPredicted RBP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 ZFYVE21Q9BQ24 234 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 PTGFRNQ9P2B2 879 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 SAC3D1A6NKF1 404 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 SNAP29O95721 258 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 ONECUT2O95948 504 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 GBAP04062 536 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 PNLIPP16233 465 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 HLCSP50747 726 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 TGM3Q08188 693 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 RUNX2Q13950 521 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 LIN52Q52LA3 116 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 C6orf120Q7Z4R8 191 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 WDR5BQ86VZ2 330 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 C2orf73Q8N5S3 287 aaPredicted RBP6.77□□□□□ -1.33
NPHP1-201ENST00000316534 CAMKVQ8NCB2 501 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 OR4E2Q8NGC2 313 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 OR56A1Q8NGH5 318 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 BBS10Q8TAM1 723 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 FBXO30Q8TB52 745 aa6.77□□□□□ -1.33
NPHP1-201ENST00000316534 KLHDC7BQ96G42 594 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms