RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ELP5Q8TE02 316 aa13.15□□□□□ -0.3
CLCN6-201ENST00000312413 LRR1Q96L50 414 aa13.15□□□□□ -0.3
CLCN6-201ENST00000312413 NSUN5Q96P11 429 aaKnown RBP13.15□□□□□ -0.3
CLCN6-201ENST00000312413 UNC119BA6NIH7 251 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 PRAMEF11O60813 436 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 RAD51DO75771 328 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 RHCEP18577 417 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 HYAL2Q12891 473 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 TSPYL5Q86VY4 417 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 ACBD7Q8N6N7 88 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 OR4C15Q8NGM1 316 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 SUSD3Q96L08 255 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 MROQ9BYG7 248 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 TMEM248Q9NWD8 314 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 SCML2Q9UQR0 700 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 PPLO60437 1756 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 NFAT5O94916 1531 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 C1orf196B1AJZ1 125 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 OXSR1O95747 527 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 FGFBP1Q14512 234 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 NKAPLQ5M9Q1 402 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 PLEKHS1Q5SXH7 462 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 MMAAQ8IVH4 418 aaKnown RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 ARL14Q8N4G2 192 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 CHDHQ8NE62 594 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 NINJ1Q92982 152 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 UNKLQ9H9P5 680 aaKnown RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 ZNF701Q9NV72 531 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 NUFIP1Q9UHK0 495 aaKnown RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 DHDHQ9UQ10 334 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 KDM4FA0A1W2PPD8 638 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 SLC22A31A6NKX4 558 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 ELNP15502 786 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 RPL10P27635 214 aaKnown RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 RPL35P42766 123 aaKnown RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 OC90Q02509 493 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 RELAQ04206 551 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 POU4F2Q12837 409 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 PTPRCAPQ14761 206 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 UNC50Q53HI1 259 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 SLC22A10Q63ZE4 541 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 GPAT4Q86UL3 456 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 COMTD1Q86VU5 262 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 URM1Q9BTM9 101 aaKnown RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 ACSL6Q9UKU0 697 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 TMEM14AQ9Y6G1 99 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 A0A1W2PRU2 124 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 B4GALT2O60909 372 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 OR12D1P0DN82 309 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 ACVR1BP36896 505 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 COQ5Q5HYK3 327 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 SUSD1Q6UWL2 747 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 ASRGL1Q7L266 308 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 TMPRSS9Q7Z410 1059 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 VWA5B2Q8N398 1253 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 CHCHD4Q8N4Q1 142 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 DDX1Q92499 740 aaKnown RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 LHPPQ9H008 270 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 POLMQ9NP87 494 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 TRBV2A0A0J9YWF9 115 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 ALPPL2P10696 532 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 BMP2P12643 396 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 HSD17B1P14061 328 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 NAA10P41227 235 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 ACTA2P62736 377 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 ACTG2P63267 376 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 POU6F2P78424 691 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 AMZ1Q400G9 498 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 MS4A13Q5J8X5 152 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 FCRL3Q96P31 734 aaPredicted RBP13.14□□□□□ -0.31
CLCN6-201ENST00000312413 C17orf62Q9BQA9 187 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 HDHD5Q9BXW7 423 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 CLEC4EQ9ULY5 219 aa13.14□□□□□ -0.31
CLCN6-201ENST00000312413 FKTNO75072 461 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 PAHP00439 452 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 UCHL1P09936 223 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 TM4SF1P30408 202 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 TMEM205Q6UW68 189 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 GTPBP8Q8N3Z3 284 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-201ENST00000312413 ZNF283Q8N7M2 679 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 DENND1AQ8TEH3 1009 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 MYRFLQ96LU7 910 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 POT1Q9NUX5 634 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 TAS2R8Q9NYW2 309 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 YARS2Q9Y2Z4 477 aaKnown RBP13.13□□□□□ -0.31
CLCN6-201ENST00000312413 GLOD5A6NK44 160 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 SFRP4Q6FHJ7 346 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-201ENST00000312413 MS4A15Q8N5U1 240 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 OR51A7Q8NH64 312 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 ZNF486Q96H40 463 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-201ENST00000312413 SLC25A44Q96H78 314 aaPredicted RBP13.13□□□□□ -0.31
CLCN6-201ENST00000312413 GPR83Q9NYM4 423 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 YIPF1Q9Y548 306 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 PDYNP01213 254 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 INCA1Q0VD86 236 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 SNTA1Q13424 505 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 TBC1D15Q8TC07 691 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 PROKR1Q8TCW9 393 aa13.13□□□□□ -0.31
CLCN6-201ENST00000312413 TMEM68Q96MH6 324 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms