RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 GPATCH2Q9NW75 528 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 SPATA6Q9NWH7 488 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 SEC14L3Q9UDX4 400 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 DYRK1BQ9Y463 629 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 PRRG1O14668 218 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 XPAP23025 273 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 PXNP49023 591 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 SLBPQ14493 270 aaKnown RBP eCLIP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 GRHL2Q6ISB3 625 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 REEP3Q6NUK4 255 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 HMGN2P46Q86SG4 172 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 RDH10Q8IZV5 341 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 CPA6Q8N4T0 437 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 ARL14EPQ8N8R7 260 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 TRPV1Q8NER1 839 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 OR2AP1Q8NGE2 309 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 OR52P1PQ8NH57 321 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 TEFMQ96QE5 360 aaKnown RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 SMAD5Q99717 465 aaKnown RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 BHLHE41Q9C0J9 482 aaPredicted RBP10.63□□□□□ -0.71
PTPN7-201ENST00000309017 NDUFB11Q9NX14 153 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 COQ3Q9NZJ6 369 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 ZNF222Q9UK12 451 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 PATJQ8NI35 1801 aa10.63□□□□□ -0.71
PTPN7-201ENST00000309017 TMEM229AB2RXF0 380 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 LYRM1O43325 122 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 HPGDSO60760 199 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 SOCS5O75159 536 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 RAB36O95755 333 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 CKMP06732 381 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 MPC1LP0DKB6 136 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 CPN2P22792 545 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 GZMKP49863 264 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 RPS25P62851 125 aaKnown RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 PLEKHS1Q5SXH7 462 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 ASB18Q6ZVZ8 466 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 VN1R5Q7Z5H4 357 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 PLCZ1Q86YW0 608 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 CBARPQ8N350 705 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 NANOGP1Q8N7R0 232 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 NLGN4YQ8NFZ3 816 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 UFD1Q92890 307 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 WRAP53Q9BUR4 548 aaKnown RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 TMED9Q9BVK6 235 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 CHST8Q9H2A9 424 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 MIXL1Q9H2W2 232 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 CWH43Q9H720 699 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 STOX2Q9P2F5 926 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 TRPC4Q9UBN4 977 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 TMPRSS11EQ9UL52 423 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 CLCA2Q9UQC9 943 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 SGTAO43765 313 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 VNN2O95498 520 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 RAE1P78406 368 aaKnown RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 ALDH6A1Q02252 535 aaKnown RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 CNTN1Q12860 1018 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 ELAVL2Q12926 359 aaKnown RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 GINS1Q14691 196 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 ABI3BPQ7Z7G0 1075 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 REPS1Q96D71 796 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 RNF170Q96K19 258 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 WDFY2Q96P53 400 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 B4GALT6Q9UBX8 382 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 HCN2Q9UL51 889 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 MGAT4BQ9UQ53 548 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 AP1M2Q9Y6Q5 423 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 INMT-MINDY4F8WBC2 141 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 PIPP12273 146 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 HSD3B1P14060 373 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 HSD3B2P26439 372 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 AVPR1BP47901 424 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 MAPK12P53778 367 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 MANFP55145 182 aaKnown RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 HSPB3Q12988 150 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 POM121L1PQ3SYA9 428 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 HSDL2Q6YN16 418 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 FAM92BQ6ZTR7 304 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 MEX3DQ86XN8 651 aaKnown RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 OR8H3Q8N146 312 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 C2orf73Q8N5S3 287 aaPredicted RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 WDR48Q8TAF3 677 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 CHTF18Q8WVB6 975 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 HDHD5Q9BXW7 423 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 SUV39H2Q9H5I1 410 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 GALNT9Q9HCQ5 603 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 C1GALT1Q9NS00 363 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 LSM7Q9UK45 103 aaKnown RBP10.62□□□□□ -0.71
PTPN7-201ENST00000309017 MYO10Q9HD67 2058 aa10.62□□□□□ -0.71
PTPN7-201ENST00000309017 HTTP42858 3142 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 A0A0B4J293 547 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 PLA2G10O15496 165 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 SLC28A2O43868 658 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 UGDHO60701 494 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 ZNF8P17098 575 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 RECQLP46063 649 aaPredicted RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 DGKGP49619 791 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 CSTF1Q05048 431 aaKnown RBP10.61□□□□□ -0.71
PTPN7-201ENST00000309017 CRB2Q5IJ48 1285 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 C19orf48Q6RUI8 117 aa10.61□□□□□ -0.71
PTPN7-201ENST00000309017 ZNF783Q6ZMS7 281 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms