RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 DAG1Q14118 895 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 GRB7Q14451 532 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ACOX1Q15067 660 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PCBP2Q15366 365 aaKnown RBP eCLIP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 OR4D1Q15615 310 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PFKFB4Q16877 469 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF284Q2VY69 593 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 C5orf22Q49AR2 442 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF542PQ5EBM4 170 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 AARS2Q5JTZ9 985 aaKnown RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 RAP1GAP2Q684P5 730 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D3GQ6DHY5 549 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D3CQ6IPX1 549 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ANKRD26P1Q6NSI1 321 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 NANOGP8Q6NSW7 305 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 NIPAL1Q6NVV3 410 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TTC23LQ6PF05 361 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 AFTPHQ6ULP2 937 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 GCNT7Q6ZNI0 430 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 DCDC5Q6ZRR9 648 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 KCTD8Q6ZWB6 473 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PTAR1Q7Z6K3 402 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 C14orf80Q86SX3 495 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TRIM74Q86UV6 250 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TRIM73Q86UV7 250 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 IQCHQ86VS3 1027 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TRIM69Q86WT6 500 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ZFAND4Q86XD8 727 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TBC1D3Q8IZP1 549 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 FAM9CQ8IZT9 166 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 C8orf59Q8N0T1 100 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 LGI2Q8N0V4 545 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 SNX31Q8N9S9 440 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 GLB1L3Q8NCI6 653 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF248Q8NDW4 579 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PIK3C3Q8NEB9 887 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 GIPC3Q8TF64 312 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CYGBQ8WWM9 190 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 S100ZQ8WXG8 99 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF566Q969W8 418 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 VPS33AQ96AX1 596 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ARRDC3Q96B67 414 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 SDCCAG3Q96C92 435 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 HSPBAP1Q96EW2 488 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 WBP1Q96G27 269 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 VMP1Q96GC9 406 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PLEKHA8Q96JA3 519 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 BMFQ96LC9 184 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 APOLD1Q96LR9 279 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TBATAQ96M53 351 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF578Q96N58 590 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TRIB3Q96RU7 358 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF347Q96SE7 839 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 SH3GL1Q99961 368 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CHID1Q9BWS9 393 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PAIP1Q9H074 479 aaKnown RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 MAGEH1Q9H213 219 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 TUBB1Q9H4B7 451 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 MAGIXQ9H6Y5 334 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 IPPKQ9H8X2 491 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 NANOGQ9H9S0 305 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 POLR1BQ9H9Y6 1135 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ANKHQ9HCJ1 492 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 ACSS2Q9NR19 701 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 MARCH4Q9P2E8 410 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 IFT80Q9P2H3 777 aaPredicted RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 DNAJB9Q9UBS3 223 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PCTPQ9UKL6 214 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PAIP2BQ9ULR5 123 aaKnown RBP4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CDC14AQ9UNH5 594 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 AURKCQ9UQB9 309 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 WDR37Q9Y2I8 494 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 FIS1Q9Y3D6 152 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 PCDHGB1Q9Y5G3 927 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 HSPE1-MOB4S4R3N1 261 aa4.68□□□□□ -1.66
CKS1B-201ENST00000308987 CELSR1Q9NYQ6 3014 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ATP6AP2A0A1C7CYW4 349 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ASPDHA6ND91 283 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 POM121BA6NF01 834 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 KRTAP29-1A8MX34 341 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CDRT15L2A8MXV6 281 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 SUPT3HB4E1H0 165 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 H7C0S8 307 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 K7ERQ8 282 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 M0QX08 132 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 UPK1AO00322 258 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 KPNA4O00629 521 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 RAD51BO15315 384 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 SLC16A6O15403 523 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 KLK10O43240 276 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 VPS26AO75436 327 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 SUPT3HO75486 399 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 NDUFS3O75489 264 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ZNF821O75541 412 aaPredicted RBP4.67□□□□□ -1.66
CKS1B-201ENST00000308987 ATP6AP2O75787 350 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 SULT1C4O75897 302 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CLPXO76031 633 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 CNTN5O94779 1100 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 WDR47O94967 919 aa4.67□□□□□ -1.66
CKS1B-201ENST00000308987 BCL10O95999 233 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms