RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 CLPPQ16740 277 aaPredicted RBP16.55■□□□□ 0.24
KRT28-201ENST00000306658 FAM214AQ32MH5 1076 aa16.55■□□□□ 0.24
KRT28-201ENST00000306658 ERICH5Q6P6B1 374 aa16.55■□□□□ 0.24
KRT28-201ENST00000306658 ANGPTL8Q6UXH0 198 aa16.55■□□□□ 0.24
KRT28-201ENST00000306658 GPR155Q7Z3F1 870 aa16.55■□□□□ 0.24
KRT28-201ENST00000306658 OR4D9Q8NGE8 314 aa16.55■□□□□ 0.24
KRT28-201ENST00000306658 OR9A4Q8NGU2 314 aa16.55■□□□□ 0.24
KRT28-201ENST00000306658 PSMA8Q8TAA3 256 aa16.55■□□□□ 0.24
KRT28-201ENST00000306658 IFI44Q8TCB0 444 aa16.55■□□□□ 0.24
KRT28-201ENST00000306658 PNPT1Q8TCS8 783 aaKnown RBP16.55■□□□□ 0.24
KRT28-201ENST00000306658 CNRIP1Q96F85 164 aaPredicted RBP16.55■□□□□ 0.24
KRT28-201ENST00000306658 GLIPR2Q9H4G4 154 aa16.55■□□□□ 0.24
KRT28-201ENST00000306658 CLK4Q9HAZ1 481 aaKnown RBP16.55■□□□□ 0.24
KRT28-201ENST00000306658 ENAMQ9NRM1 1142 aa16.55■□□□□ 0.24
KRT28-201ENST00000306658 VPS13AQ96RL7 3174 aa16.55■□□□□ 0.24
KRT28-201ENST00000306658 SPTBP11277 2137 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 A0A1W2PQM1 296 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 TMEM150CB9EJG8 249 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 OR2B3O76000 313 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 NSA2O95478 260 aaKnown RBP16.54■□□□□ 0.24
KRT28-201ENST00000306658 ANPEPP15144 967 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 GPC1P35052 558 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 AVPR1BP47901 424 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 SLC34A1Q06495 639 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 VAC14Q08AM6 782 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 CEBPEQ15744 281 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 GPR135Q8IZ08 494 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 CLEC4FQ8N1N0 589 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 CA13Q8N1Q1 262 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 DTWD1Q8N5C7 304 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 OR4K14Q8NGD5 310 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 OR52N2Q8NGI0 321 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 C10orf90Q96M02 699 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 NSMCE2Q96MF7 247 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 TRIM4Q9C037 500 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 SPRTNQ9H040 489 aaPredicted RBP16.54■□□□□ 0.24
KRT28-201ENST00000306658 CXorf36Q9H7Y0 433 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 GORASP2Q9H8Y8 452 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 FANCEQ9HB96 536 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 SEMA3GQ9NS98 782 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 PDP2Q9P2J9 529 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 STOML1Q9UBI4 398 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 SERTAD3Q9UJW9 196 aa16.54■□□□□ 0.24
KRT28-201ENST00000306658 ATXN7L1Q9ULK2 861 aaPredicted RBP16.54■□□□□ 0.24
KRT28-201ENST00000306658 A0A0A6YYC8 382 aaPredicted RBP16.53■□□□□ 0.24
KRT28-201ENST00000306658 I3L1I5 382 aaPredicted RBP16.53■□□□□ 0.24
KRT28-201ENST00000306658 DNAJB6O75190 326 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 RDH16O75452 317 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 KCNK5O95279 499 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 BAG2O95816 211 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 ANKRD34CP0C6C1 535 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 FEN1P39748 380 aaKnown RBP16.53■□□□□ 0.24
KRT28-201ENST00000306658 CRATP43155 626 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 RAB38P57729 211 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 FADDQ13158 208 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 GPR19Q15760 415 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 SPDYE7PQ495Y7 208 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 MTX3Q5HYI7 312 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 CPZQ66K79 652 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 ZNF574Q6ZN55 896 aaPredicted RBP16.53■□□□□ 0.24
KRT28-201ENST00000306658 DBX2Q6ZNG2 339 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 CCDC116Q8IYX3 515 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 OR5T3Q8NGG3 340 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 OR5AK3PQ8NH89 298 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 FIG4Q92562 907 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 TANKQ92844 425 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 DUS3LQ96G46 650 aaKnown RBP16.53■□□□□ 0.24
KRT28-201ENST00000306658 CSF3RQ99062 836 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 DPH2Q9BQC3 489 aaPredicted RBP16.53■□□□□ 0.24
KRT28-201ENST00000306658 RNF103-CHMP3A0A140T963 221 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 LNP1A1A4G5 178 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 CXCR6O00574 342 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 CYR61O00622 381 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 CHST10O43529 356 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 FOXS1O43638 330 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 RETP07949 1114 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 C8orf89P0DMQ9 161 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 UMPSP11172 480 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 POLE2P56282 527 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 SIM1P81133 766 aaPredicted RBP16.53■□□□□ 0.24
KRT28-201ENST00000306658 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.53■□□□□ 0.24
KRT28-201ENST00000306658 TLDC1Q6P9B6 456 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 C10orf111Q8N326 155 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 ADAMTS18Q8TE60 1221 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 ZNF681Q96N22 645 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 EFHD1Q9BUP0 239 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 SYNDIG1Q9H7V2 258 aa16.53■□□□□ 0.24
KRT28-201ENST00000306658 WDFY4Q6ZS81 3184 aa16.52■□□□□ 0.24
KRT28-201ENST00000306658 RALGAPA1Q6GYQ0 2036 aa16.52■□□□□ 0.24
KRT28-201ENST00000306658 ZNF318Q5VUA4 2279 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 H0YIG0 161 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 H3BNX3 289 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 CASC3O15234 703 aaKnown RBP16.52■□□□□ 0.23
KRT28-201ENST00000306658 FLRT2O43155 660 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 LDOC1O95751 146 aaPredicted RBP16.52■□□□□ 0.23
KRT28-201ENST00000306658 C1QCP02747 245 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 RNH1P13489 461 aaKnown RBP16.52■□□□□ 0.23
KRT28-201ENST00000306658 FOLR1P15328 257 aa16.52■□□□□ 0.23
KRT28-201ENST00000306658 PSMA4P25789 261 aaKnown RBP16.52■□□□□ 0.23
KRT28-201ENST00000306658 SLC7A1P30825 629 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms