RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 A0A1W2PRU2 124 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 UNC119BA6NIH7 251 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 CREBL2O60519 120 aaPredicted RBP12.32□□□□□ -0.44
COL3A1-201ENST00000304636 HTR2AP28223 471 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 CNR2P34972 360 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 ERVK-21P61565 698 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 POU4F2Q12837 409 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 GFOD2Q3B7J2 385 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 COMMD7Q86VX2 200 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 CHPT1Q8WUD6 406 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 CUEDC1Q9NWM3 386 aaPredicted RBP12.32□□□□□ -0.44
COL3A1-201ENST00000304636 MRPL3P09001 348 aaKnown RBP12.32□□□□□ -0.44
COL3A1-201ENST00000304636 OSMP13725 252 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 SNRPD2P62316 118 aaKnown RBP12.32□□□□□ -0.44
COL3A1-201ENST00000304636 VAMP2P63027 116 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 TXNDC8Q6A555 127 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 GDF6Q6KF10 455 aaPredicted RBP12.32□□□□□ -0.44
COL3A1-201ENST00000304636 KLBQ86Z14 1044 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 OR52N2Q8NGI0 321 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 SUN3Q8TAQ9 357 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 TSNAXQ99598 290 aaKnown RBP12.32□□□□□ -0.44
COL3A1-201ENST00000304636 P2RY13Q9BPV8 354 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 ARL6Q9H0F7 186 aa12.32□□□□□ -0.44
COL3A1-201ENST00000304636 IGKV6D-21A0A0A0MT36 114 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 A0A1B0GVT2 93 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 JRKO75564 520 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 ALPPL2P10696 532 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 EDNRBP24530 442 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 RPL19P84098 196 aaKnown RBP12.31□□□□□ -0.44
COL3A1-201ENST00000304636 TMEM115Q12893 351 aaPredicted RBP12.31□□□□□ -0.44
COL3A1-201ENST00000304636 UBE2UQ5VVX9 321 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 KCTD9Q7L273 389 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 SYNPOQ8N3V7 929 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 METTL25Q8N6Q8 603 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 RHBDF1Q96CC6 855 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 C20orf27Q9GZN8 174 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 Q9N2J8 555 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 LAMP5Q9UJQ1 280 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 TIAM2Q8IVF5 1701 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 C7orf72A4D263 438 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 UGT2B10P36537 528 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 MTNR1AP48039 350 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 FOXA1P55317 472 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 SLC22A10Q63ZE4 541 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 PYHIN1Q6K0P9 492 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 B3GNT9Q6UX72 402 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 ACBD7Q8N6N7 88 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 SGCDQ92629 289 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 HDHD5Q9BXW7 423 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 CENPMQ9NSP4 180 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 LIPT1Q9Y234 373 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 A0A1B0GVC2 190 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 SLC22A31A6NKX4 558 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 AP1G1O43747 822 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 MEF2AQ02078 507 aaPredicted RBP12.31□□□□□ -0.44
COL3A1-201ENST00000304636 SOX4Q06945 474 aaPredicted RBP12.31□□□□□ -0.44
COL3A1-201ENST00000304636 DOC2AQ14183 400 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 SPCS2Q15005 226 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 RHEBQ15382 184 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 ZNF691Q5VV52 312 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 CES4AQ5XG92 561 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 TCEAL6Q6IPX3 200 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 PDZD9Q8IXQ8 264 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 GRHPRQ9UBQ7 328 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 CFAP20Q9Y6A4 193 aaKnown RBP12.31□□□□□ -0.44
COL3A1-201ENST00000304636 ENPP4Q9Y6X5 453 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 MYH11P35749 1972 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 HMX3A6NHT5 357 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 SLC31A1O15431 190 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 APOC3P02656 99 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 GTF2F2P13984 249 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 IL4RP24394 825 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 AGTR1P30556 359 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 ZNF33BQ06732 778 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 VEZF1Q14119 521 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 AGAP6Q5VW22 663 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 HDDC3Q8N4P3 179 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 AGAP4Q96P64 663 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 EVA1BQ9NVM1 165 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 NUFIP1Q9UHK0 495 aaKnown RBP12.31□□□□□ -0.44
COL3A1-201ENST00000304636 GPN3Q9UHW5 284 aaPredicted RBP12.31□□□□□ -0.44
COL3A1-201ENST00000304636 C14orf166Q9Y224 244 aaKnown RBP12.31□□□□□ -0.44
COL3A1-201ENST00000304636 GPR45Q9Y5Y3 372 aa12.31□□□□□ -0.44
COL3A1-201ENST00000304636 CYB5AP00167 134 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 PET100P0DJ07 73 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 RAB8AP61006 207 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 FGL1Q08830 312 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 ZNF792Q3KQV3 632 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 LETMD1Q6P1Q0 360 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 TSPAN33Q86UF1 283 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 CLECL1Q8IZS7 167 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 OR8S1Q8NH09 359 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 DGAT2Q96PD7 388 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 ZNF142P52746 1687 aaPredicted RBP12.3□□□□□ -0.44
COL3A1-201ENST00000304636 ZNF878C9JN71 531 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 RPS17P08708 135 aaKnown RBP12.3□□□□□ -0.44
COL3A1-201ENST00000304636 PVALBP20472 110 aaPredicted RBP12.3□□□□□ -0.44
COL3A1-201ENST00000304636 GCGRP47871 477 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 EFR3AQ14156 821 aa12.3□□□□□ -0.44
COL3A1-201ENST00000304636 GTDC1Q4AE62 458 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms