RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 AIFM1O95831 613 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 CST1P01037 141 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 NUDT7P0C024 238 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 ZNF888P0CJ79 500 aaPredicted RBP11.35□□□□□ -0.59
TPM3-202ENST00000302206 LSSP48449 732 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 CHN2P52757 468 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 DSTNP60981 165 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 RAB8AP61006 207 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 BTN3A2P78410 334 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 CDK6Q00534 326 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 SCARB2Q14108 478 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 LRRC23Q53EV4 343 aaPredicted RBP11.35□□□□□ -0.59
TPM3-202ENST00000302206 CRB2Q5IJ48 1285 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 C6orf52Q5T4I8 152 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 BHLHB9Q6PI77 547 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 PATL1Q86TB9 770 aaKnown RBP11.35□□□□□ -0.59
TPM3-202ENST00000302206 RNF130Q86XS8 419 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 ZDHHC21Q8IVQ6 265 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 APLFQ8IW19 511 aaPredicted RBP11.35□□□□□ -0.59
TPM3-202ENST00000302206 CHERPQ8IWX8 916 aaKnown RBP11.35□□□□□ -0.59
TPM3-202ENST00000302206 CLEC4FQ8N1N0 589 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 ARL14Q8N4G2 192 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 DEFB119Q8N690 84 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 SUMF1Q8NBK3 374 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 KCT2Q8NC54 265 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 OR5K1Q8NHB7 308 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 TFAP2CQ92754 450 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 N4BP2L2Q92802 583 aaPredicted RBP11.35□□□□□ -0.59
TPM3-202ENST00000302206 TMBIM1Q969X1 311 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 SDCCAG3Q96C92 435 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 VPS50Q96JG6 964 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 BBS4Q96RK4 519 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 MACROD1Q9BQ69 325 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 ANKRD60Q9BZ19 345 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 GLIPR2Q9H4G4 154 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 LYRM4Q9HD34 91 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 EVA1BQ9NVM1 165 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 MS4A12Q9NXJ0 267 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 USE1Q9NZ43 259 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 SCOCQ9UIL1 159 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 ACSL6Q9UKU0 697 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 DOLKQ9UPQ8 538 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 ENTPD4Q9Y227 616 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 ANGPT4Q9Y264 503 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 CSNK1G3Q9Y6M4 447 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 CACNA1IQ9P0X4 2223 aa11.35□□□□□ -0.59
TPM3-202ENST00000302206 A0A0J9YVX5 310 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 H0YGG7 62 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 PDLIM1O00151 329 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 DLGAP1O14490 977 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 EI24O14681 340 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 P2RX6O15547 441 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 SUV39H1O43463 412 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 B3GALT2O43825 422 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 GCM2O75603 506 aaPredicted RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 SNRNP200O75643 2136 aaKnown RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 UBXN7O94888 489 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 ZNF682O95780 498 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 STATHP02808 62 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 MT-ND1P03886 318 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 NR2F6P10588 404 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 ZNF23P17027 643 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 ALOX12P18054 663 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 CSNK2A2P19784 350 aaPredicted RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 BCKDHBP21953 392 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 MAOBP27338 520 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 BUD31P41223 144 aaPredicted RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 CCT3P49368 545 aaKnown RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 CDK9P50750 372 aaKnown RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 ANXA11P50995 505 aaKnown RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 ALDH3A2P51648 485 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 AFF3P51826 1226 aaKnown RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 EPHA4P54764 986 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 C21orf59P57076 290 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 PCBP3P57721 371 aaKnown RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 ARF3P61204 181 aaPredicted RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 SELENOWP63302 87 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 TNFRSF17Q02223 184 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 DAG1Q14118 895 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 C16orf72Q14CZ0 275 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 SPDYE7PQ495Y7 208 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 CYBRD1Q53TN4 286 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 ZC3H12BQ5HYM0 836 aaKnown RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 TMEM214Q6NUQ4 689 aaKnown RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 ANGPTL8Q6UXH0 198 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 C6orf120Q7Z4R8 191 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 C11orf74Q86VG3 221 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 CARM1Q86X55 608 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 HIPK1Q86Z02 1210 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 ZDHHC13Q8IUH4 622 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 SFTPA2Q8IWL1 248 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 NRBF2Q96F24 287 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 HSH2DQ96JZ2 352 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 MAPKAP1Q9BPZ7 522 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 DOHHQ9BU89 302 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 NPLQ9BXD5 320 aaPredicted RBP11.34□□□□□ -0.59
TPM3-202ENST00000302206 CHRNA10Q9GZZ6 450 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 RAB33BQ9H082 229 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 MIR1-1HGQ9H1L0 117 aa11.34□□□□□ -0.59
TPM3-202ENST00000302206 CAAP1Q9H8G2 361 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms