RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 IQCCQ4KMZ1 466 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 TNFAIP8L2Q6P589 184 aaPredicted RBP21.06■□□□□ 0.96
SMAD1-201ENST00000302085 HS3ST5Q8IZT8 346 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 TAMM41Q96BW9 452 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 DOHHQ9BU89 302 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 ADI1Q9BV57 179 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 DUSP15Q9H1R2 295 aaPredicted RBP21.06■□□□□ 0.96
SMAD1-201ENST00000302085 UCK1Q9HA47 277 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 FAM60AQ9NP50 221 aa21.06■□□□□ 0.96
SMAD1-201ENST00000302085 M0QX08 132 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 FABP3P05413 133 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 FEN1P39748 380 aaKnown RBP21.05■□□□□ 0.96
SMAD1-201ENST00000302085 DCTP40126 519 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 HNRNPKP61978 463 aaKnown RBP eCLIP21.05■□□□□ 0.96
SMAD1-201ENST00000302085 MYBPC1Q00872 1141 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 DAG1Q14118 895 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 DEFB133Q30KQ1 61 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 SVOPLQ8N434 492 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 AVL9Q8NBF6 648 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 OR5K1Q8NHB7 308 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 MAFAQ8NHW3 353 aaPredicted RBP21.05■□□□□ 0.96
SMAD1-201ENST00000302085 ZFP28Q8NHY6 868 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 C7orf34Q96L11 122 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 C10orf90Q96M02 699 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 ZNF681Q96N22 645 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 ANKRD60Q9BZ19 345 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 SERHL2Q9H4I8 314 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 TMEM74BQ9NUR3 256 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 UCKL1Q9NWZ5 548 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 LMO7DNF2Z398 122 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 SDC3O75056 442 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 SNAP29O95721 258 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 C9P02748 559 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 OPN1SWP03999 348 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 ALPLP05186 524 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 CSNK2A2P19784 350 aaPredicted RBP21.05■□□□□ 0.96
SMAD1-201ENST00000302085 GPC1P35052 558 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 ALDH3A2P51648 485 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 PCBP3P57721 371 aaKnown RBP21.05■□□□□ 0.96
SMAD1-201ENST00000302085 MYBPC3Q14896 1274 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 SLC36A3Q495N2 470 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 OGFOD3Q6PK18 319 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 ISLR2Q6UXK2 745 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 PIWIL3Q7Z3Z3 882 aaKnown RBP21.05■□□□□ 0.96
SMAD1-201ENST00000302085 SMURF2Q9HAU4 748 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 IL21RQ9HBE5 538 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 A4GALTQ9NPC4 353 aa21.05■□□□□ 0.96
SMAD1-201ENST00000302085 ZSCAN9O15535 394 aaPredicted RBP21.04■□□□□ 0.96
SMAD1-201ENST00000302085 NR2F6P10588 404 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 ALPPL2P10696 532 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 ALOX12P18054 663 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 LIM2P55344 173 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 VSX2P58304 361 aaPredicted RBP21.04■□□□□ 0.96
SMAD1-201ENST00000302085 TP53BP2Q13625 1128 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 SIM2Q14190 667 aaPredicted RBP21.04■□□□□ 0.96
SMAD1-201ENST00000302085 CEBPEQ15744 281 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 CRB2Q5IJ48 1285 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 ANKRD34AQ69YU3 496 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 OR2T5Q6IEZ7 315 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 ABHD13Q7L211 337 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 OR2T29Q8NH02 315 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 RAB8BQ92930 207 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 TBC1D20Q96BZ9 403 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 ENTPD4Q9Y227 616 aa21.04■□□□□ 0.96
SMAD1-201ENST00000302085 DPPA5A6NC42 116 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 HMGN4O00479 90 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 BCAT2O15382 392 aaPredicted RBP21.03■□□□□ 0.96
SMAD1-201ENST00000302085 B3GALT2O43825 422 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 SMNDC1O75940 238 aaKnown RBP eCLIP21.03■□□□□ 0.96
SMAD1-201ENST00000302085 DIRAS1O95057 198 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 GNAO1P09471 354 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 TFPTP0C1Z6 253 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 CPN2P22792 545 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 ELOAQ14241 798 aaKnown RBP21.03■□□□□ 0.96
SMAD1-201ENST00000302085 MANEAQ5SRI9 462 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 PRPF38BQ5VTL8 546 aaKnown RBP21.03■□□□□ 0.96
SMAD1-201ENST00000302085 OR52E8Q6IFG1 317 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 TSSK4Q6SA08 328 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 PRSS41Q7RTY9 318 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 TSEN54Q7Z6J9 526 aaKnown RBP21.03■□□□□ 0.96
SMAD1-201ENST00000302085 CSNK1A1LQ8N752 337 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 SLC38A5Q8WUX1 472 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 OSBPL10Q9BXB5 764 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 STARD5Q9NSY2 213 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 ZSCAN32Q9NX65 697 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 PHF11Q9UIL8 331 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 ANGPT4Q9Y264 503 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 SPAG17Q6Q759 2223 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 SLC9B1P1A6NJY1 282 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 PROS1P07225 676 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 CDH3P22223 829 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 PRKACGP22612 351 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 C21orf59P57076 290 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 TNFRSF17Q02223 184 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 MAPK11Q15759 364 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 GPR19Q15760 415 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 REEP3Q6NUK4 255 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 KLHL35Q6PF15 583 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 SLC30A8Q8IWU4 369 aa21.03■□□□□ 0.96
SMAD1-201ENST00000302085 DHRSXQ8N5I4 330 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms