RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 AIF1LQ9BQI0 150 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 CXorf36Q9H7Y0 433 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 PHPT1Q9NRX4 125 aaPredicted RBP20.86■□□□□ 0.93
TPM4-201ENST00000300933 TAS2R9Q9NYW1 312 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 USE1Q9NZ43 259 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 DNAJB5O75953 348 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 CCR8P51685 355 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 HSPB3Q12988 150 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 TNFAIP8L2Q6P589 184 aaPredicted RBP20.86■□□□□ 0.93
TPM4-201ENST00000300933 Q6ZPB1 254 aaPredicted RBP20.86■□□□□ 0.93
TPM4-201ENST00000300933 NUDT18Q6ZVK8 323 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 VASH1Q7L8A9 365 aaPredicted RBP20.86■□□□□ 0.93
TPM4-201ENST00000300933 PHF10Q8WUB8 498 aaKnown RBP20.86■□□□□ 0.93
TPM4-201ENST00000300933 SMPDL3AQ92484 453 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 ELSPBP1Q96BH3 223 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 MRPL38Q96DV4 380 aaKnown RBP20.86■□□□□ 0.93
TPM4-201ENST00000300933 C7orf34Q96L11 122 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 TM9SF3Q9HD45 589 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 LHX9Q9NQ69 397 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 TEX10Q9NXF1 929 aaPredicted RBP20.86■□□□□ 0.93
TPM4-201ENST00000300933 ORC6Q9Y5N6 252 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 CKAP5Q14008 2032 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 SCN3AQ9NY46 2000 aa20.86■□□□□ 0.93
TPM4-201ENST00000300933 TMPRSS11DO60235 418 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 EGFP01133 1207 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 MT-ND2P03891 347 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 SEMG1P04279 462 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 IL1RNP18510 177 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 GTF2E2P29084 291 aaKnown RBP20.85■□□□□ 0.93
TPM4-201ENST00000300933 RRM2P31350 389 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 EIF2DP41214 584 aaKnown RBP20.85■□□□□ 0.93
TPM4-201ENST00000300933 ENPP2Q13822 863 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 PDE7AQ13946 482 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 STEAP3Q658P3 488 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 FAM83FQ8NEG4 500 aaPredicted RBP20.85■□□□□ 0.93
TPM4-201ENST00000300933 ZHX1-C8orf76Q96EF9 292 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 CAMK1GQ96NX5 476 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 C6orf62Q9GZU0 229 aaPredicted RBP20.85■□□□□ 0.93
TPM4-201ENST00000300933 THUMPD1Q9NXG2 353 aaKnown RBP20.85■□□□□ 0.93
TPM4-201ENST00000300933 MSRAQ9UJ68 235 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 J3KTA2 159 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 UPK1BO75841 260 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 CCDC159P0C7I6 412 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 ST13P50502 369 aaKnown RBP20.85■□□□□ 0.93
TPM4-201ENST00000300933 COPZ1P61923 177 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 SCARB2Q14108 478 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 VEZF1Q14119 521 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 IQCCQ4KMZ1 466 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 IL17RCQ8NAC3 791 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 ZNF540Q8NDQ6 660 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 UBE2E3Q969T4 207 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 TM4SF18Q96CE8 201 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 OTUB1Q96FW1 271 aaPredicted RBP20.85■□□□□ 0.93
TPM4-201ENST00000300933 ZNF486Q96H40 463 aaPredicted RBP20.85■□□□□ 0.93
TPM4-201ENST00000300933 C17orf62Q9BQA9 187 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 KLHL31Q9H511 634 aa20.85■□□□□ 0.93
TPM4-201ENST00000300933 ZBTB20Q9HC78 741 aaPredicted RBP20.85■□□□□ 0.93
TPM4-201ENST00000300933 PRAMEF25A6NGN4 478 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 TNFRSF21O75509 655 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 DNTTP04053 509 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 BSGP35613 385 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 SLC19A1P41440 591 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 RPS21P63220 83 aaKnown RBP20.84■□□□□ 0.93
TPM4-201ENST00000300933 SZRD1Q7Z422 152 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 RAB8BQ92930 207 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 MS4A8Q9BY19 250 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 REEP1Q9H902 201 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 CPNE5Q9HCH3 593 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 FGF22Q9HCT0 170 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 C1GALT1Q9NS00 363 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 RASSF1Q9NS23 344 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 KLF8O95600 359 aaPredicted RBP20.84■□□□□ 0.93
TPM4-201ENST00000300933 EML2O95834 649 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 ARHGDIAP52565 204 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 ADPRHP54922 357 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 RPS26P11Q5JNZ5 115 aaPredicted RBP20.84■□□□□ 0.93
TPM4-201ENST00000300933 PSD4Q8NDX1 1056 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 TXNDC15Q96J42 360 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 C1QTNF2Q9BXJ5 285 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 ADPRHL2Q9NX46 363 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 SPHK1Q9NYA1 384 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 KIF17Q9P2E2 1029 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 RAB23Q9ULC3 237 aa20.84■□□□□ 0.93
TPM4-201ENST00000300933 KRT75O95678 551 aa20.83■□□□□ 0.93
TPM4-201ENST00000300933 EIF2S1P05198 315 aaKnown RBP20.83■□□□□ 0.93
TPM4-201ENST00000300933 ALPPL2P10696 532 aa20.83■□□□□ 0.93
TPM4-201ENST00000300933 ERGP11308 486 aa20.83■□□□□ 0.93
TPM4-201ENST00000300933 AK4P27144 223 aaPredicted RBP20.83■□□□□ 0.93
TPM4-201ENST00000300933 DNAJA1P31689 397 aaKnown RBP20.83■□□□□ 0.93
TPM4-201ENST00000300933 CLK3P49761 638 aaKnown RBP20.83■□□□□ 0.93
TPM4-201ENST00000300933 CSNK1G2P78368 415 aa20.83■□□□□ 0.93
TPM4-201ENST00000300933 SYT16Q17RD7 645 aa20.83■□□□□ 0.93
TPM4-201ENST00000300933 GCNT6Q5T4J0 391 aa20.83■□□□□ 0.93
TPM4-201ENST00000300933 CCL4L1Q8NHW4 92 aa20.83■□□□□ 0.93
TPM4-201ENST00000300933 AICDAQ9GZX7 198 aa20.83■□□□□ 0.93
TPM4-201ENST00000300933 BTBD1Q9H0C5 482 aa20.83■□□□□ 0.93
TPM4-201ENST00000300933 SYNPO2LQ9H987 977 aa20.83■□□□□ 0.93
TPM4-201ENST00000300933 A0A1W2PQF6 199 aa20.83■□□□□ 0.92
TPM4-201ENST00000300933 TPD52L2O43399 206 aaKnown RBP20.83■□□□□ 0.92
TPM4-201ENST00000300933 RPN2P04844 631 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms