RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 APCDD1Q8J025 514 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 HUS1BQ8NHY5 278 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 SORBS1Q9BX66 1292 aaKnown RBP13.98□□□□□ -0.17
COL6A2-201ENST00000300527 SEMA3GQ9NS98 782 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 RBFOX1Q9NWB1 397 aaKnown RBP13.98□□□□□ -0.17
COL6A2-201ENST00000300527 CORO2BQ9UQ03 480 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 MRPS7Q9Y2R9 242 aaKnown RBP13.98□□□□□ -0.17
COL6A2-201ENST00000300527 ANKRD36A6QL64 1941 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 MYO16Q9Y6X6 1858 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 LOC285556D6RIA3 1793 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 PRKYO43930 277 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 CELF2O95319 508 aaKnown RBP13.98□□□□□ -0.17
COL6A2-201ENST00000300527 CD79BP40259 229 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 RPA4Q13156 261 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 CDONQ4KMG0 1287 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 FAAH2Q6GMR7 532 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 LAMTOR1Q6IAA8 161 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 MACC1Q6ZN28 852 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 TPGS1Q6ZTW0 290 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 SLC30A8Q8IWU4 369 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 LILRA3Q8N6C8 439 aaPredicted RBP13.98□□□□□ -0.17
COL6A2-201ENST00000300527 TM9SF4Q92544 642 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 SLC9A6Q92581 669 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 ANGPT4Q9Y264 503 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 GSTK1Q9Y2Q3 226 aa13.98□□□□□ -0.17
COL6A2-201ENST00000300527 IQCMA0A1B0GVH7 501 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 C1orf226A1L170 272 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 GTPBP1O00178 669 aaKnown RBP13.97□□□□□ -0.17
COL6A2-201ENST00000300527 IGHA2P01877 340 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 XCR1P46094 333 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 LIM2P55344 173 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 PIN1Q13526 163 aaPredicted RBP13.97□□□□□ -0.17
COL6A2-201ENST00000300527 GPR162Q16538 588 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 POM121L1PQ3SYA9 428 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 TOR1AIP1Q5JTV8 583 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 TCTE3Q8IZS6 198 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 PGBD3Q8N328 593 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 AKAP1Q92667 903 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL6A2-201ENST00000300527 SCAMP4Q969E2 229 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 MAGEB10Q96LZ2 347 aaPredicted RBP13.97□□□□□ -0.17
COL6A2-201ENST00000300527 RDH14Q9HBH5 336 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 NDUFB11Q9NX14 153 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 C5AR2Q9P296 337 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 POLHQ9Y253 713 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 STC2O76061 302 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 IFNA14P01570 189 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 PDGFAP04085 211 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 PTGER1P34995 402 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 TAS2R50P59544 299 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 PLD1Q13393 1074 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 GINS1Q14691 196 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 HECTD3Q5T447 861 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 UNC5DQ6UXZ4 953 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 PLEKHM3Q6ZWE6 761 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 LRRC17Q8N6Y2 441 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 NANOGP1Q8N7R0 232 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 BEST4Q8NFU0 473 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 MRPS31Q92665 395 aaKnown RBP13.97□□□□□ -0.17
COL6A2-201ENST00000300527 SLC6A18Q96N87 628 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 CLCA2Q9UQC9 943 aa13.97□□□□□ -0.17
COL6A2-201ENST00000300527 LOC105369274A0A096LPK9 316 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 SYNDIG1LA6NDD5 238 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 B8ZZF3 427 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 PRRG1O14668 218 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 NME6O75414 186 aaPredicted RBP13.96□□□□□ -0.17
COL6A2-201ENST00000300527 OAZ2O95190 189 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 OSMP13725 252 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 CELP19835 753 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 SMSP52788 366 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 PFN3P60673 137 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 COL9A2Q14055 689 aaPredicted RBP13.96□□□□□ -0.17
COL6A2-201ENST00000300527 SYTL3Q4VX76 610 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 IDNKQ5T6J7 187 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 CEACAM20Q6UY09 585 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 GLRX5Q86SX6 157 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 OR4N4Q8N0Y3 316 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 CHCHD4Q8N4Q1 142 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 L3MBTL4Q8NA19 623 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 AP3S1Q92572 193 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 UROC1Q96N76 676 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 SLC12A9Q9BXP2 914 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 MIEF1Q9NQG6 463 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 KLHL21Q9UJP4 597 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 SNTNA6NMZ2 147 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 KLK1P06870 262 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 PTX3P26022 381 aaPredicted RBP13.96□□□□□ -0.17
COL6A2-201ENST00000300527 HLA-DMAP28067 261 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 B4GALNT1Q00973 533 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 MLLT1Q03111 559 aaPredicted RBP13.96□□□□□ -0.17
COL6A2-201ENST00000300527 MAP4K2Q12851 820 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 ZSWIM7Q19AV6 140 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 C19orf48Q6RUI8 117 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 MSANTD1Q6ZTZ1 278 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 LAS2Q8IYD9 372 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 WDR48Q8TAF3 677 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 BTN2A2Q8WVV5 523 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 TMEM245Q9H330 911 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 NKIRAS2Q9NYR9 191 aa13.96□□□□□ -0.17
COL6A2-201ENST00000300527 LSM2Q9Y333 95 aaKnown RBP13.96□□□□□ -0.17
COL6A2-201ENST00000300527 GREB1Q4ZG55 1949 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms