RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 A0A0A6YYH2 397 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 A6NJ64 397 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SNAI1O95863 264 aaPredicted RBP13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GPR17Q13304 367 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 EFR3AQ14156 821 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF805Q5CZA5 627 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RAET1LQ5VY80 246 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TREML1Q86YW5 311 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PRR11Q96HE9 360 aaPredicted RBP13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SRRDQ9UH36 339 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 DUOX1Q9NRD9 1551 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 NOTOA8MTQ0 251 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 KCNE1P15382 129 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ARSFP54793 590 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SOX4Q06945 474 aaPredicted RBP13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 DEFB110Q30KQ9 67 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ERN2Q76MJ5 926 aaKnown RBP13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MAL2Q969L2 176 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OARD1Q9Y530 152 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SYNGR4O95473 234 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SOD2P04179 222 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MAP4K2Q12851 820 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF792Q3KQV3 632 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 C6orf136Q5SQH8 315 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 NEIL3Q8TAT5 605 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 C12orf42Q96LP6 360 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MRM3Q9HC36 420 aaKnown RBP13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 WASF3Q9UPY6 502 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 GPR52Q9Y2T5 361 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 NID2Q14112 1375 aa13.02□□□□□ -0.33
CHRFAM7A-201ENST00000299847 FAM171A2A8MVW0 826 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RFPL1O75677 317 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CRYZQ08257 329 aaKnown RBP13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PACRGLQ8N7B6 248 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 FAM46AQ96IP4 442 aaKnown RBP13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SECISBP2Q96T21 854 aaKnown RBP13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TMEM185BQ9H7F4 350 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PTGES2Q9H7Z7 377 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZBTB20Q9HC78 741 aaPredicted RBP13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR2S2Q9NQN1 319 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SPHK2Q9NRA0 654 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 DHDHQ9UQ10 334 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LRRN3E7EW58 273 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RFPL2O75678 378 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MSL3P1P0C860 447 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 FASLGP48023 281 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SLCO2A1Q92959 643 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF649Q9BS31 505 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF717Q9BY31 904 aaPredicted RBP13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LRRN3Q9H3W5 708 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 EXOSC1Q9Y3B2 195 aaKnown RBP13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RAD1O60671 282 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 FESP07332 822 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PLCXD2Q0VAA5 305 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 COMTD1Q86VU5 262 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RFT1Q96AA3 541 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MGAT4BQ9UQ53 548 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ZNF705EA8MWA4 302 aaPredicted RBP13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 STT3AP46977 705 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 REM2Q8IYK8 340 aaPredicted RBP13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CLECL1Q8IZS7 167 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 RBP7Q96R05 134 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PPP4R1LQ9P1A2 415 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 C19orf25Q9UFG5 118 aaPredicted RBP13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CLEC4EQ9ULY5 219 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 SORBS2O94875 1100 aaKnown RBP13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ADORA3P0DMS8 318 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PFKLP17858 780 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 UNC50Q53HI1 259 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CFAP77Q6ZQR2 320 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TMPRSS12Q86WS5 348 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PEX11GQ96HA9 241 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 FN3KQ9H479 309 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 MTMR10Q9NXD2 777 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 KCNN3Q9UGI6 736 aa13.01□□□□□ -0.33
CHRFAM7A-201ENST00000299847 YY2O15391 372 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 STSP08842 583 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 LSSP48449 732 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 EIF5AP63241 154 aaKnown RBP13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 AIMP2Q13155 320 aaKnown RBP13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 KCNAB2Q13303 367 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 HSD17B12Q53GQ0 312 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TMEM69Q5SWH9 247 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 KANK2Q63ZY3 851 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TSPAN33Q86UF1 283 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 IQCF1Q8N6M8 205 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR8K5Q8NH50 307 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 FAXDC2Q96IV6 333 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR10A4Q9H209 315 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TP63Q9H3D4 680 aaPredicted RBP13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PREBQ9HCU5 417 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 EPHA6Q9UF33 1036 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PRKCAP17252 672 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 CES4AQ5XG92 561 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 OR10T2Q8NGX3 314 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 PCYT2Q99447 389 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 TPSD1Q9BZJ3 242 aa13□□□□□ -0.33
CHRFAM7A-201ENST00000299847 ASB6Q9NWX5 421 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms