RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 SERPINI1Q99574 410 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 MAPKAP1Q9BPZ7 522 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 NDC1Q9BTX1 674 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 SLC26A1Q9H2B4 701 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 ELOVL6Q9H5J4 265 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 CCDC134Q9H6E4 229 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 DDX31Q9H8H2 851 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 BRF2Q9HAW0 419 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 ANKHQ9HCJ1 492 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 THAP1Q9NVV9 213 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 IRAK4Q9NWZ3 460 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 MARCOQ9UEW3 520 aaPredicted RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 NDOR1Q9UHB4 597 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 ADGRE2Q9UHX3 823 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 SNX6Q9UNH7 406 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 SLC12A4Q9UP95 1085 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 EXO1Q9UQ84 846 aaKnown RBP5.56□□□□□ -1.52
SSX3-201ENST00000298396 DLGAP4Q9Y2H0 992 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 ASB4Q9Y574 426 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 IGSF10Q6WRI0 2623 aa5.56□□□□□ -1.52
SSX3-201ENST00000298396 SMG1Q96Q15 3661 aaKnown RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 NCKAP5O14513 1909 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ATP6AP2A0A1C7CYW4 349 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 A0A1W2PS29 197 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ARHGAP10A1A4S6 786 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 TCP11X1B4DZS4 312 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 H0YIG0 161 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 MASP2O00187 686 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 CYR61O00622 381 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ATP6AP2O75787 350 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 BMP10O95393 424 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 BPNT1O95861 308 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 KLK1P06870 262 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 HBQ1P09105 142 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 FURINP09958 794 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 RAB40ALP0C0E4 278 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 KITP10721 976 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 HSD3B1P14060 373 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ALOX15P16050 662 aaPredicted RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 TACR1P25103 407 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 HSD3B2P26439 372 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ITPKBP27987 946 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 DLSTP36957 453 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 MDH1P40925 334 aaKnown RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 EIF2S3P41091 472 aaKnown RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 SSR2P43308 183 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 XCR1P46094 333 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 RHAGQ02094 409 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ZNF33BQ06732 778 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ABHD18Q0P651 414 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 NCF4Q15080 339 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 NDUFA9Q16795 377 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 FAM214AQ32MH5 1076 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 SLC9B1Q4ZJI4 515 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 RFTN2Q52LD8 501 aaPredicted RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 HSP90B2PQ58FF3 399 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 VWA2Q5GFL6 755 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 C10orf62Q5T681 223 aaPredicted RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 ATP1A1-AS1Q5TC04 95 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ARHGAP40Q5TG30 622 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ATG16L1Q676U5 607 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 C18orf63Q68DL7 685 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 PRMT9Q6P2P2 845 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 TRIM40Q6P9F5 258 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 SHISA6Q6ZSJ9 500 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 FAM47EQ6ZV65 393 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 MED25Q71SY5 747 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ABHD13Q7L211 337 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 OVCH1Q7RTY7 1134 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 CLNKQ7Z7G1 428 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 PROSER1Q86XN7 944 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 WDR75Q8IWA0 830 aaKnown RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 SPACA3Q8IXA5 215 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ZCCHC7Q8N3Z6 543 aaKnown RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 ESX1Q8N693 406 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 OR51Q1Q8NH59 317 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 FAM76AQ8TAV0 307 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.55□□□□□ -1.52
SSX3-201ENST00000298396 STT3BQ8TCJ2 826 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 LRRC8CQ8TDW0 803 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ADAMTS17Q8TE56 1095 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 SREK1Q8WXA9 508 aaKnown RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 ZCCHC14Q8WYQ9 949 aaKnown RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 FKBP10Q96AY3 582 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 C19orf60Q96EN9 201 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 PEX11GQ96HA9 241 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 MAELQ96JY0 434 aaKnown RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 PPP1R36Q96LQ0 422 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ZNF317Q96PQ6 595 aaPredicted RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 KCNC2Q96PR1 638 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 TBCDQ9BTW9 1192 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 EBPLQ9BY08 206 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 NLNQ9BYT8 704 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 NUF2Q9BZD4 464 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 VN1R1Q9GZP7 353 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 ILKAPQ9H0C8 392 aaPredicted RBP5.55□□□□□ -1.52
SSX3-201ENST00000298396 ACTL8Q9H568 366 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 MEAF6Q9HAF1 191 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 KCNK13Q9HB14 408 aa5.55□□□□□ -1.52
SSX3-201ENST00000298396 EML4Q9HC35 981 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms