RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 EFCAB10A6NFE3 127 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 LILRB5O75023 590 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 CSO75390 466 aaKnown RBP23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 IFNA14P01570 189 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 CSF2RAP15509 400 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 EIF4HQ15056 248 aaKnown RBP23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 TUBA3EQ6PEY2 450 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 SCAIQ8N9R8 606 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 FAM46DQ8NEK8 389 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 CXorf40BQ96DE9 158 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 CDCA4Q9BXL8 241 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 TVP23BQ9NYZ1 205 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 REV1Q9UBZ9 1251 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 KLK4Q9Y5K2 254 aa23.19■■□□□ 1.3
SPTSSA-201ENST00000298130 M0R3H8 397 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 QSOX1O00391 747 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 NME6O75414 186 aaPredicted RBP23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 PRKRAO75569 313 aaKnown RBP23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 HMGA2P52926 109 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 COPZ1P61923 177 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 OLR1P78380 273 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 TARDBPQ13148 414 aaKnown RBP eCLIP23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 LIPKQ5VXJ0 399 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 NRARPQ7Z6K4 114 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 LAX1Q8IWV1 398 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 MAPKAP1Q9BPZ7 522 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 MACROD1Q9BQ69 325 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 YIPF4Q9BSR8 244 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 PRR14Q9BWN1 585 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 KCNK12Q9HB15 430 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 ANHXE9PGG2 379 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 MAPK12P53778 367 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 ERVFC1P60507 584 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 SYPL1Q16563 259 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 PRAMEF14Q5SWL7 426 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 C6orf183Q5T699 404 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 PRAMEF13Q5VWM6 474 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 PLPP4Q5VZY2 271 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 GATAD2AQ86YP4 633 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 FAM20CQ8IXL6 584 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 UBE2J2Q8N2K1 259 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 SLC6A18Q96N87 628 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 GLOD5A6NK44 160 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 ELAVL4P26378 380 aaKnown RBP23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 DAB2P98082 770 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 RSBN1Q5VWQ0 802 aaPredicted RBP23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 SLC9B2Q86UD5 537 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 CCDC190Q86UF4 302 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 ANKRD53Q8N9V6 530 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 DTD2Q96FN9 168 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 UCK2Q9BZX2 261 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 TIGARQ9NQ88 270 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 TMCC3Q9ULS5 477 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 CARD8Q9Y2G2 431 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 UGT2A1Q9Y4X1 527 aa23.18■■□□□ 1.3
SPTSSA-201ENST00000298130 DENND4CQ5VZ89 1909 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 NTN1O95631 604 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 PTTG1O95997 202 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 PTX3P26022 381 aaPredicted RBP23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 BMPR1AP36894 532 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 DGKGP49619 791 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 ZNF658BQ4V348 819 aaPredicted RBP23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 SLC39A5Q6ZMH5 540 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 ZFYVE19Q96K21 471 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 LRRC3BQ96PB8 259 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 SLC30A2Q9BRI3 323 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 ZDHHC5Q9C0B5 715 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 HOXD1Q9GZZ0 328 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 RNF208Q9H0X6 261 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 SEMA3GQ9NS98 782 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 TMEM39AQ9NV64 488 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 MAPRE3Q9UPY8 281 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 YARS2Q9Y2Z4 477 aaKnown RBP23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 H3BQ06 376 aaPredicted RBP23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 H7BY64 318 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 TFECO14948 347 aaPredicted RBP23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 CCNKO75909 580 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 HBQ1P09105 142 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 UQCRC2P22695 453 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 DCST1Q5T197 706 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 C6orf120Q7Z4R8 191 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 XAGE5Q8WWM1 108 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 PRAP1Q96NZ9 151 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 TBC1D24Q9ULP9 559 aa23.17■■□□□ 1.3
SPTSSA-201ENST00000298130 TLX2O43763 284 aaPredicted RBP23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 LZTS3O60299 673 aaPredicted RBP23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 CLEC2LP0C7M8 214 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 SLC15A1P46059 708 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 XKP51811 444 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 PRKAG1P54619 331 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 E2F2Q14209 437 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 LRRC26Q2I0M4 334 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 SLC7A13Q8TCU3 470 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 NXPE3Q969Y0 559 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 TEX10Q9NXF1 929 aaPredicted RBP23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 MFN2O95140 757 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 RHOP08100 348 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 OR12D1P0DN82 309 aa23.16■■□□□ 1.3
SPTSSA-201ENST00000298130 IFITM2Q01629 132 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms