RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ABHD13Q7L211 337 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 SLC25A45Q8N413 288 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 ZNF655Q8N720 491 aaPredicted RBP14.71□□□□□ -0.06
LSM6-201ENST00000296581 MAPKAP1Q9BPZ7 522 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 DPH2Q9BQC3 489 aaPredicted RBP14.71□□□□□ -0.06
LSM6-201ENST00000296581 FAM60AQ9NP50 221 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 SIRT3Q9NTG7 399 aaPredicted RBP14.71□□□□□ -0.06
LSM6-201ENST00000296581 ACSL6Q9UKU0 697 aa14.71□□□□□ -0.06
LSM6-201ENST00000296581 CNOT11Q9UKZ1 510 aaKnown RBP14.71□□□□□ -0.06
LSM6-201ENST00000296581 CACNA1EQ15878 2313 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 SCN3AQ9NY46 2000 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 PRKRAO75569 313 aaKnown RBP14.7□□□□□ -0.06
LSM6-201ENST00000296581 NUDT7P0C024 238 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 GIMD1P0DJR0 217 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 GNSP15586 552 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 SHBQ15464 509 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 COX20Q5RI15 118 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 C18orf63Q68DL7 685 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 TMEM214Q6NUQ4 689 aaKnown RBP14.7□□□□□ -0.06
LSM6-201ENST00000296581 SLC48A1Q6P1K1 146 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 ENPP6Q6UWR7 440 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 PATL1Q86TB9 770 aaKnown RBP14.7□□□□□ -0.06
LSM6-201ENST00000296581 EID3Q8N140 333 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 FAM86B1Q8N7N1 296 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 FBXO30Q8TB52 745 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 ZCCHC10Q8TBK6 192 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 KLHL6Q8WZ60 621 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 ELF4Q99607 663 aaPredicted RBP14.7□□□□□ -0.06
LSM6-201ENST00000296581 CHID1Q9BWS9 393 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 NLNQ9BYT8 704 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 RAB33BQ9H082 229 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 C1GALT1Q9NS00 363 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 V9GYQ6 96 aa14.7□□□□□ -0.06
LSM6-201ENST00000296581 MYO1GB0I1T2 1018 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 PGRMC2O15173 223 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 TPST1O60507 370 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 SERPINA1P01009 418 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 ALOX12P18054 663 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 ZNF10P21506 573 aaPredicted RBP14.69□□□□□ -0.06
LSM6-201ENST00000296581 PCGF2P35227 344 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 SOAT1P35610 550 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 CHI3L1P36222 383 aaPredicted RBP14.69□□□□□ -0.06
LSM6-201ENST00000296581 AQP4P55087 323 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 CHRNB3Q05901 458 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 BNIP3Q12983 259 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 SPIDRQ14159 915 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 C16orf72Q14CZ0 275 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 ATP6AP1Q15904 470 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 SMUG1Q53HV7 270 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 SAXO2Q658L1 398 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 ALDH16A1Q8IZ83 802 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 CSNK1A1LQ8N752 337 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 OR5AK3PQ8NH89 298 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 NEURL3Q96EH8 262 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 RNF145Q96MT1 663 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 IL21RQ9HBE5 538 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 TMEM74BQ9NUR3 256 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 KCMF1Q9P0J7 381 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 PILRBQ9UKJ0 227 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 MRPS2Q9Y399 296 aaKnown RBP14.69□□□□□ -0.06
LSM6-201ENST00000296581 FAM32AQ9Y421 112 aaKnown RBP14.69□□□□□ -0.06
LSM6-201ENST00000296581 RNF103-CHMP3A0A140T963 221 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 SLC9B1P1A6NJY1 282 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 WASHC1A8K0Z3 465 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 ZNF26P17031 533 aaPredicted RBP14.69□□□□□ -0.06
LSM6-201ENST00000296581 HOXB6P17509 224 aaKnown RBP14.69□□□□□ -0.06
LSM6-201ENST00000296581 CRATP43155 626 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 CSTF1Q05048 431 aaKnown RBP14.69□□□□□ -0.06
LSM6-201ENST00000296581 RBBP4Q09028 425 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 CEBPEQ15744 281 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 NKG7Q16617 165 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 PLK5Q496M5 336 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 DEFB134Q4QY38 66 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 RNF130Q86XS8 419 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 C1orf210Q8IVY1 113 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 IQCF2Q8IXL9 164 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 DNAJC22Q8N4W6 341 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 EME1Q96AY2 570 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 CENPNQ96H22 339 aaPredicted RBP14.69□□□□□ -0.06
LSM6-201ENST00000296581 AMDHD1Q96NU7 426 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 MAP3K3Q99759 626 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 GLIPR2Q9H4G4 154 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 MAGIXQ9H6Y5 334 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 PRDM9Q9NQV7 894 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 EPHA6Q9UF33 1036 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 SUSD2Q9UGT4 822 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 RAPGEFL1Q9UHV5 662 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 PHF11Q9UIL8 331 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 RNF215Q9Y6U7 377 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 SDK1Q7Z5N4 2213 aa14.69□□□□□ -0.06
LSM6-201ENST00000296581 GLOD5A6NK44 160 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 RHPN2P1A8MT19 583 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 HCRTR1O43613 425 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 B3GALT2O43825 422 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 PRKD3O94806 890 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 PGM3O95394 542 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 EIF2S1P05198 315 aaKnown RBP14.68□□□□□ -0.06
LSM6-201ENST00000296581 NR2F6P10588 404 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 ETFAP13804 333 aa14.68□□□□□ -0.06
LSM6-201ENST00000296581 NTSP30990 170 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms