RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 VNN3Q9NY84 501 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 ACTR10Q9NZ32 417 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 C5AR2Q9P296 337 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 SIT1Q9Y3P8 196 aa8.67□□□□□ -1.02
PDPN-201ENST00000294489 LOC100130705A0A1B0GUX0 176 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 TRIM64A6NGJ6 449 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 C5orf58C9J3I9 102 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 GCM2O75603 506 aaPredicted RBP8.66□□□□□ -1.02
PDPN-201ENST00000294489 HOXB3P14651 431 aaPredicted RBP8.66□□□□□ -1.02
PDPN-201ENST00000294489 ITGA2P17301 1181 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 GSTT1P30711 240 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 NTSP30990 170 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 PEX19P40855 299 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 CXCL12P48061 93 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 CRYBA2P53672 197 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 CDH15P55291 814 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 NXPH1P58417 271 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 SLAMF1Q13291 335 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 CRB2Q5IJ48 1285 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 TOR1AIP1Q5JTV8 583 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 SAXO2Q658L1 398 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 ABHD17CQ6PCB6 329 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 BORAQ6PGQ7 559 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 ZNF793Q6ZN11 406 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 VN1R4Q7Z5H5 301 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 AMER3Q8N944 861 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 AVL9Q8NBF6 648 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 MAFAQ8NHW3 353 aaPredicted RBP8.66□□□□□ -1.02
PDPN-201ENST00000294489 PSMA8Q8TAA3 256 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 RSC1A1Q92681 617 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 ZNF347Q96SE7 839 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 MBOAT4Q96T53 435 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 ZSCAN32Q9NX65 697 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 PDP1Q9P0J1 537 aaPredicted RBP8.66□□□□□ -1.02
PDPN-201ENST00000294489 KIF17Q9P2E2 1029 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 PCDHGB3Q9Y5G1 929 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 TMEM247A6NEH6 219 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 AXIN1O15169 862 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 ADAMDEC1O15204 470 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 PPM1DO15297 605 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 VIPP01282 170 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 C9P02748 559 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 STATHP02808 62 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 OPN1SWP03999 348 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 JUNDP17535 347 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 GPC1P35052 558 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 FASLGP48023 281 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 SH3BGRP55822 239 aaPredicted RBP8.66□□□□□ -1.02
PDPN-201ENST00000294489 EEF1A2Q05639 463 aaKnown RBP8.66□□□□□ -1.02
PDPN-201ENST00000294489 RGS1Q08116 209 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 IL18R1Q13478 541 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 REEP3Q6NUK4 255 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 OGFOD3Q6PK18 319 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 RNF44Q7L0R7 432 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 ACOT4Q8N9L9 421 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 OR8K5Q8NH50 307 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 PATE1Q8WXA2 126 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 SPACA7Q96KW9 195 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 OR2A5Q96R48 311 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 EPYCQ99645 322 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 MACROD1Q9BQ69 325 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 TMEM121BQ9BXQ6 578 aaPredicted RBP8.66□□□□□ -1.02
PDPN-201ENST00000294489 AMBRA1Q9C0C7 1298 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 SLC35C2Q9NQQ7 365 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 THUMPD1Q9NXG2 353 aaKnown RBP8.66□□□□□ -1.02
PDPN-201ENST00000294489 APOBEC3BQ9UH17 382 aaKnown RBP8.66□□□□□ -1.02
PDPN-201ENST00000294489 TMEFF2Q9UIK5 374 aaPredicted RBP8.66□□□□□ -1.02
PDPN-201ENST00000294489 KLHL20Q9Y2M5 609 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 ASB4Q9Y574 426 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 COMMD3-BMI1R4GMX3 469 aa8.66□□□□□ -1.02
PDPN-201ENST00000294489 C2orf74A8MZ97 194 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 KIF1CO43896 1103 aaKnown RBP8.65□□□□□ -1.02
PDPN-201ENST00000294489 UGT2B11O75310 529 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 ATP5A1P25705 553 aaKnown RBP8.65□□□□□ -1.02
PDPN-201ENST00000294489 ALDH3B2P48448 385 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 CCT3P49368 545 aaKnown RBP8.65□□□□□ -1.02
PDPN-201ENST00000294489 RPS6KA3P51812 740 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 IL1RL1Q01638 556 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 RPL6Q02878 288 aaKnown RBP8.65□□□□□ -1.02
PDPN-201ENST00000294489 RBM48Q5RL73 367 aaKnown RBP8.65□□□□□ -1.02
PDPN-201ENST00000294489 CEP68Q76N32 757 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 C6orf120Q7Z4R8 191 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 TAF8Q7Z7C8 310 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 ATG16L2Q8NAA4 619 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 PIK3C3Q8NEB9 887 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 ZDHHC1Q8WTX9 485 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 TAMM41Q96BW9 452 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 BBS4Q96RK4 519 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 PRDM9Q9NQV7 894 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 PRMT8Q9NR22 394 aaPredicted RBP8.65□□□□□ -1.02
PDPN-201ENST00000294489 DDX18Q9NVP1 670 aaKnown RBP8.65□□□□□ -1.02
PDPN-201ENST00000294489 OR6C74A6NCV1 312 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 TRIM64CA6NLI5 447 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 SLC16A6O15403 523 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 ITGAMP11215 1152 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 CTSEP14091 401 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 BCKDHBP21953 392 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 EEF1B2P24534 225 aaKnown RBP8.65□□□□□ -1.02
PDPN-201ENST00000294489 PIGAP37287 484 aa8.65□□□□□ -1.02
PDPN-201ENST00000294489 PXNP49023 591 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms