RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 PTOV1Q86YD1 416 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 METTL4Q8N3J2 472 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 OR7A2PQ8NGA2 310 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 DUSP26Q9BV47 211 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 LRRC61Q9BV99 259 aa15.96■□□□□ 0.15
CPSF4-201ENST00000292476 TCEAL2Q9H3H9 227 aaPredicted RBP15.96■□□□□ 0.15
CPSF4-201ENST00000292476 RIF1Q5UIP0 2472 aaKnown RBP15.96■□□□□ 0.15
CPSF4-201ENST00000292476 PIEZO1Q92508 2521 aa15.96■□□□□ 0.14
CPSF4-201ENST00000292476 PCM1Q15154 2024 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 TRBV23OR9-2A0A075B6M9 112 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 GNG14A0A1W2PPG7 69 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 C2orf74A8MZ97 194 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 BCAT2O15382 392 aaPredicted RBP15.95■□□□□ 0.14
CPSF4-201ENST00000292476 OR1F1O43749 312 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 PCDH7O60245 1069 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ZNF682O95780 498 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 BCL10O95999 233 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 MAOBP27338 520 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
CPSF4-201ENST00000292476 PLA2G16P53816 162 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ZNF763Q0D2J5 394 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 CDK5R2Q13319 367 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ELOAQ14241 798 aaKnown RBP15.95■□□□□ 0.14
CPSF4-201ENST00000292476 GPR18Q14330 331 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 TCEA2Q15560 299 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 PLK5Q496M5 336 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 TMEM35AQ53FP2 167 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 KHDRBS2Q5VWX1 349 aaKnown RBP15.95■□□□□ 0.14
CPSF4-201ENST00000292476 KLHL35Q6PF15 583 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 TMEFF1Q8IYR6 380 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ADGRF3Q8IZF5 1079 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ZNF740Q8NDX6 193 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 C1orf216Q8TAB5 229 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 COQ8BQ96D53 544 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 APOL4Q9BPW4 351 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 EBPLQ9BY08 206 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.95■□□□□ 0.14
CPSF4-201ENST00000292476 TWSG1Q9GZX9 223 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 NAA50Q9GZZ1 169 aaKnown RBP15.95■□□□□ 0.14
CPSF4-201ENST00000292476 CHST8Q9H2A9 424 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 SPNS1Q9H2V7 528 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 GALNT8Q9NY28 637 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 TPRKBQ9Y3C4 175 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 OTOGLQ3ZCN5 2332 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ETHE1O95571 254 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 GNSP15586 552 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 PCMT1P22061 227 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 PCGF2P35227 344 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 CPTPQ5TA50 214 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 LAIR1Q6GTX8 287 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ZNF621Q6ZSS3 439 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 IKBIPQ70UQ0 350 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 COMMD6Q7Z4G1 85 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ANKRD13BQ86YJ7 626 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 NAGSQ8N159 534 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 RNF175Q8N4F7 328 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 SRFBP1Q8NEF9 429 aaKnown RBP15.95■□□□□ 0.14
CPSF4-201ENST00000292476 SLC37A2Q8TED4 501 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 EPYCQ99645 322 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 DPH7Q9BTV6 452 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ERVMER34-1Q9H9K5 563 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 CCNB1IP1Q9NPC3 277 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 VNN3Q9NY84 501 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ZNF282Q9UDV7 671 aaPredicted RBP15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ENPP5Q9UJA9 477 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 GMEB2Q9UKD1 530 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ADAM29Q9UKF5 820 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 ABCG2Q9UNQ0 655 aa15.95■□□□□ 0.14
CPSF4-201ENST00000292476 HEMK1Q9Y5R4 338 aaPredicted RBP15.95■□□□□ 0.14
CPSF4-201ENST00000292476 EP300Q09472 2414 aaPredicted RBP15.94■□□□□ 0.14
CPSF4-201ENST00000292476 FAM186AA6NE01 2351 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 PRAMEF33A0A0G2JMD5 474 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 C1orf226A1L170 272 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 E9PQ18 207 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 RNASET2O00584 256 aaKnown RBP15.94■□□□□ 0.14
CPSF4-201ENST00000292476 ANGPTL1O95841 491 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 RPS15AP62244 130 aaKnown RBP15.94■□□□□ 0.14
CPSF4-201ENST00000292476 CSNK2BP67870 215 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 HHEXQ03014 270 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 MVKQ03426 396 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 RELAQ04206 551 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 C1orf61Q13536 156 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 Q6ZNX1 250 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 GPR156Q8NFN8 814 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 GOT1L1Q8NHS2 421 aaPredicted RBP15.94■□□□□ 0.14
CPSF4-201ENST00000292476 LMX1AQ8TE12 382 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 FKBP10Q96AY3 582 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 RGMAQ96B86 450 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 MTERF3Q96E29 417 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 PITX2Q99697 317 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 MS4A8Q9BY19 250 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 BHLHE41Q9C0J9 482 aaPredicted RBP15.94■□□□□ 0.14
CPSF4-201ENST00000292476 OR51B5Q9H339 312 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 RAD21L1Q9H4I0 556 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 UCK1Q9HA47 277 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 TPT1P8Q9HAU6 139 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 ATAD3AQ9NVI7 634 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 SPHK1Q9NYA1 384 aa15.94■□□□□ 0.14
CPSF4-201ENST00000292476 SUSD2Q9UGT4 822 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms