RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 WFDC6Q9BQY6 131 aa18.08■□□□□ 0.49
SHF-201ENST00000290894 PREBQ9HCU5 417 aa18.08■□□□□ 0.49
SHF-201ENST00000290894 AMBNQ9NP70 447 aa18.08■□□□□ 0.49
SHF-201ENST00000290894 ZNF624Q9P2J8 865 aaPredicted RBP18.08■□□□□ 0.49
SHF-201ENST00000290894 NCKAP1Q9Y2A7 1128 aa18.08■□□□□ 0.49
SHF-201ENST00000290894 SDK1Q7Z5N4 2213 aa18.08■□□□□ 0.49
SHF-201ENST00000290894 HMGN4O00479 90 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 PCDHGA12O60330 932 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 COQ9O75208 318 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 OR12D1P0DN82 309 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 GSTM2P28161 218 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 TPMTP51580 245 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 NCBP2P52298 156 aaKnown RBP eCLIP18.08■□□□□ 0.48
SHF-201ENST00000290894 DUSP2Q05923 314 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 PUM1Q14671 1186 aaKnown RBP eCLIP18.08■□□□□ 0.48
SHF-201ENST00000290894 TOR1AIP1Q5JTV8 583 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 CCDC81Q6ZN84 652 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 ACOT4Q8N9L9 421 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 KCT2Q8NC54 265 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 SETD9Q8NE22 299 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 XAGE5Q8WWM1 108 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 NT5DC2Q9H857 520 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 TRPC4Q9UBN4 977 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 SNX5Q9Y5X3 404 aa18.08■□□□□ 0.48
SHF-201ENST00000290894 A0A1W2PR48 441 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 TCRBV21S2A2A0A5A6 115 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 SEC14L2O76054 403 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 FEN1P39748 380 aaKnown RBP18.07■□□□□ 0.48
SHF-201ENST00000290894 GRSF1Q12849 480 aaKnown RBP eCLIP18.07■□□□□ 0.484e-8■■■□□ 18.4
SHF-201ENST00000290894 IL18R1Q13478 541 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 KEAP1Q14145 624 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 GPR19Q15760 415 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 SYPL1Q16563 259 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 AMIGO1Q86WK6 493 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 RBM45Q8IUH3 476 aaKnown RBP18.07■□□□□ 0.48
SHF-201ENST00000290894 CCDC116Q8IYX3 515 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 NLGN4XQ8N0W4 816 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 VANGL1Q8TAA9 524 aaPredicted RBP18.07■□□□□ 0.48
SHF-201ENST00000290894 HMGB4Q8WW32 186 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 PATE1Q8WXA2 126 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 GTPBP3Q969Y2 492 aaKnown RBP18.07■□□□□ 0.48
SHF-201ENST00000290894 APOL4Q9BPW4 351 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 RAD21L1Q9H4I0 556 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 KCNK12Q9HB15 430 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 NEUROD4Q9HD90 331 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 CHRM5P08912 532 aaPredicted RBP18.07■□□□□ 0.48
SHF-201ENST00000290894 KRT20P35900 424 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 SLC9A5Q14940 896 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 MAD2L1BPQ15013 274 aaPredicted RBP18.07■□□□□ 0.48
SHF-201ENST00000290894 MAPK11Q15759 364 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 ZNF542PQ5EBM4 170 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 CCDC80Q76M96 950 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 ZNF540Q8NDQ6 660 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 GEMIN6Q8WXD5 167 aaKnown RBP18.07■□□□□ 0.48
SHF-201ENST00000290894 AMDHD1Q96NU7 426 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 RAB11FIP5Q9BXF6 653 aa18.07■□□□□ 0.48
SHF-201ENST00000290894 PRAMEF27A3QJZ7 478 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 ASGR2P07307 311 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 ZNF182P17025 639 aaPredicted RBP18.06■□□□□ 0.48
SHF-201ENST00000290894 HIST1H1TP22492 207 aaPredicted RBP18.06■□□□□ 0.48
SHF-201ENST00000290894 SERPINB1P30740 379 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 IDH2P48735 452 aaKnown RBP18.06■□□□□ 0.48
SHF-201ENST00000290894 LIM2P55344 173 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 EMX1Q04741 257 aaPredicted RBP18.06■□□□□ 0.48
SHF-201ENST00000290894 TJAP1Q5JTD0 557 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 GTF2IRD2BQ6EKJ0 949 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 ABHD17CQ6PCB6 329 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 GTF2IRD2Q86UP8 949 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 FBLIM1Q8WUP2 373 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 BBS4Q96RK4 519 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 SLC35C2Q9NQQ7 365 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 PRDM7Q9NQW5 492 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 ZCCHC3Q9NUD5 404 aaKnown RBP18.06■□□□□ 0.48
SHF-201ENST00000290894 ACER3Q9NUN7 267 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 APOBEC3BQ9UH17 382 aaKnown RBP18.06■□□□□ 0.48
SHF-201ENST00000290894 CD207Q9UJ71 328 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 FAM32AQ9Y421 112 aaKnown RBP18.06■□□□□ 0.48
SHF-201ENST00000290894 PCDHGA6Q9Y5G7 932 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 ANHXE9PGG2 379 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 TFPTP0C1Z6 253 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 TTKP33981 857 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 NFATC4Q14934 902 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 NPTX1Q15818 432 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 ENTHD1Q8IYW4 607 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 OR4C15Q8NGM1 316 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 OR10G6Q8NH81 332 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 DTNBP1Q96EV8 351 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 CSF3RQ99062 836 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 COLEC10Q9Y6Z7 277 aa18.06■□□□□ 0.48
SHF-201ENST00000290894 SLC28A2O43868 658 aa18.05■□□□□ 0.48
SHF-201ENST00000290894 FAM20BO75063 409 aa18.05■□□□□ 0.48
SHF-201ENST00000290894 WBP4O75554 376 aaKnown RBP18.05■□□□□ 0.48
SHF-201ENST00000290894 XCR1P46094 333 aa18.05■□□□□ 0.48
SHF-201ENST00000290894 GABARAPL2P60520 117 aa18.05■□□□□ 0.48
SHF-201ENST00000290894 DGCR6Q14129 220 aa18.05■□□□□ 0.48
SHF-201ENST00000290894 ZIC1Q15915 447 aa18.05■□□□□ 0.48
SHF-201ENST00000290894 LSRQ86X29 649 aaPredicted RBP18.05■□□□□ 0.48
SHF-201ENST00000290894 ARMC8Q8IUR7 673 aa18.05■□□□□ 0.48
SHF-201ENST00000290894 GPR32P1Q8NGA4 272 aa18.05■□□□□ 0.48
SHF-201ENST00000290894 CNRIP1Q96F85 164 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms