RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SLC6A17Q9H1V8 727 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 SATB2Q9UPW6 733 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 PIKFYVEQ9Y2I7 2098 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 MYO15AQ9UKN7 3530 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF670-ZNF695F2Z2N8 137 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 CTDSP2O14595 271 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 SSX4O60224 188 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 UGDHO60701 494 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 RHOCP08134 193 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 ANXA5P08758 320 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 PTBP1P26599 531 aaKnown RBP eCLIP9.85□□□□□ -0.83
UPF3B-201ENST00000276201 LIMS1P48059 325 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 SNRPGP62308 76 aaKnown RBP9.85□□□□□ -0.83
UPF3B-201ENST00000276201 SELENOWP63302 87 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 HYAL2Q12891 473 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 TARDBPQ13148 414 aaKnown RBP eCLIP9.85□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF79Q15937 498 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 SSX1Q16384 188 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 PLAG1Q6DJT9 500 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF767PQ75MW2 155 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 ASCL5Q7RTU5 278 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 SUMF1Q8NBK3 374 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 OR10Q1Q8NGQ4 319 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 FEVQ99581 238 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 SLC25A19Q9HC21 320 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 SARS2Q9NP81 518 aaKnown RBP9.85□□□□□ -0.83
UPF3B-201ENST00000276201 GPR83Q9NYM4 423 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 SH3BP4Q9P0V3 963 aa9.85□□□□□ -0.83
UPF3B-201ENST00000276201 CFAP20Q9Y6A4 193 aaKnown RBP9.85□□□□□ -0.83
UPF3B-201ENST00000276201 C1orf226A1L170 272 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 PRR23AA6NEV1 266 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 A6NL46 340 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 ZAR1LA6NP61 321 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 GPX5O75715 221 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 DIRAS1O95057 198 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 HLA-DQB1P01920 261 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 EPHX1P07099 455 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 NDUFV2P19404 249 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 CNR2P34972 360 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 STK19P49842 368 aaPredicted RBP9.84□□□□□ -0.83
UPF3B-201ENST00000276201 CRYBA2P53672 197 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 CDC42P60953 191 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 RACK1P63244 317 aaKnown RBP9.84□□□□□ -0.83
UPF3B-201ENST00000276201 RBBP4Q09028 425 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 TSTQ16762 297 aaKnown RBP9.84□□□□□ -0.83
UPF3B-201ENST00000276201 UGT8Q16880 541 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 NOXRED1Q6NXP6 359 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 ZNF783Q6ZMS7 281 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 OR8H2Q8N162 312 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 CLDN22Q8N7P3 220 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 B3GNT7Q8NFL0 401 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 CLHC1Q8NHS4 586 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 SELENOMQ8WWX9 145 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 REPS1Q96D71 796 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 OPALINQ96PE5 141 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 NEDD4LQ96PU5 975 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 MYOCQ99972 504 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 ASPNQ9BXN1 380 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 MIR1-1HGQ9H1L0 117 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 MTG2Q9H4K7 406 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 RNF167Q9H6Y7 350 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 RAD18Q9NS91 495 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 NDUFAF4Q9P032 175 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 DMDP11532 3685 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 OTOGLQ3ZCN5 2332 aa9.84□□□□□ -0.83
UPF3B-201ENST00000276201 A0A0D9SEW6 157 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 IQCF5A8MTL0 148 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 GAPDHSO14556 408 aaPredicted RBP9.83□□□□□ -0.84
UPF3B-201ENST00000276201 CRYZL1O95825 349 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 IL1AP01583 271 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 SRPRAP08240 638 aaKnown RBP9.83□□□□□ -0.84
UPF3B-201ENST00000276201 MAGP20916 626 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 CPN2P22792 545 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 TACR1P25103 407 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 CSTF2P33240 577 aaKnown RBP eCLIP9.83□□□□□ -0.84
UPF3B-201ENST00000276201 SLC6A12P48065 614 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 HNMTP50135 292 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 NCF4Q15080 339 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 GPR33Q49SQ1 333 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 SLC35F1Q5T1Q4 408 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 ANXA8L1Q5VT79 327 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 HSDL2Q6YN16 418 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 C11orf74Q86VG3 221 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 SERPINA9Q86WD7 417 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 SLC5A8Q8N695 610 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 OR7D4Q8NG98 312 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 MRGPRX1Q96LB2 322 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 PANX1Q96RD7 426 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 CCM2Q9BSQ5 444 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 MED18Q9BUE0 208 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 HHATLQ9HCP6 504 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 C14orf119Q9NWQ9 140 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 CLN6Q9NWW5 311 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 ERVK13-1Q9NX77 482 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 PAQR5Q9NXK6 330 aaPredicted RBP9.83□□□□□ -0.84
UPF3B-201ENST00000276201 KCTD5Q9NXV2 234 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 FTSJ1Q9UET6 329 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 CMAHPQ9Y471 501 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 KRT87PA6NCN2 255 aa9.83□□□□□ -0.84
UPF3B-201ENST00000276201 CCDC182A6NF36 153 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms