RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 PARVBQ9HBI1 364 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 ABCF3Q9NUQ8 709 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 TAS2R13Q9NYV9 303 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 GALPQ9UBC7 116 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 TRMT6Q9UJA5 497 aaKnown RBP9.06□□□□□ -0.96
LRTM1-201ENST00000273286 CDC42EP3Q9UKI2 254 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 ZNF835Q9Y2P0 537 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 MED16Q9Y2X0 877 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 CCDC168Q8NDH2 2452 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 F8P00451 2351 aa9.06□□□□□ -0.96
LRTM1-201ENST00000273286 ANKRD17O75179 2603 aaKnown RBP9.06□□□□□ -0.96
LRTM1-201ENST00000273286 ZCWPW2A0A1B0GU75 182 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 SYNDIG1LA6NDD5 238 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 URADA6NGE7 173 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 CEP104O60308 925 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 SLC1A2P43004 574 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 KCNJ1P48048 391 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 AP1S2P56377 157 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 CSNK1G2P78368 415 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 OC90Q02509 493 aaPredicted RBP9.05□□□□□ -0.96
LRTM1-201ENST00000273286 CTBP1Q13363 440 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 CUL1Q13616 776 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 TM4SF20Q53R12 229 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 SFT2D3Q587I9 215 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 AGTRAPQ6RW13 159 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 USP51Q70EK9 711 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 LARP4Q71RC2 724 aaKnown RBP eCLIP9.05□□□□□ -0.96
LRTM1-201ENST00000273286 STRA8Q7Z7C7 330 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 CAND1Q86VP6 1230 aaKnown RBP9.05□□□□□ -0.96
LRTM1-201ENST00000273286 CRLF3Q8IUI8 442 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 PLD3Q8IV08 490 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 DENND6AQ8IWF6 608 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 POGLUT1Q8NBL1 392 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 ATL1Q8WXF7 558 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 TMEM125Q96AQ2 219 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 MTFMTQ96DP5 389 aaKnown RBP9.05□□□□□ -0.96
LRTM1-201ENST00000273286 C14orf79Q96F83 325 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 LURAP1Q96LR2 239 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 OR14A2Q96R54 314 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 OLFM1Q99784 485 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 TRIM54Q9BYV2 358 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 C12orf65Q9H3J6 166 aaKnown RBP9.05□□□□□ -0.96
LRTM1-201ENST00000273286 FBXO6Q9NRD1 293 aaPredicted RBP9.05□□□□□ -0.96
LRTM1-201ENST00000273286 C20orf96Q9NUD7 363 aaPredicted RBP9.05□□□□□ -0.96
LRTM1-201ENST00000273286 HCN3Q9P1Z3 774 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 SH3BGRL2Q9UJC5 107 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 FBXO5Q9UKT4 447 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 MAD1L1Q9Y6D9 718 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 NCOA6Q14686 2063 aaPredicted RBP9.05□□□□□ -0.96
LRTM1-201ENST00000273286 IGHV3-20A0A0C4DH32 117 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 TCRBV7S3A2A0A539 114 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 GABRR3A8MPY1 467 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 E9PLN8 166 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 SGK494L7N484 410 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 CYR61O00622 381 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 FCHO1O14526 889 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 ASNA1O43681 348 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 AVILO75366 819 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 TTC4O95801 387 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 TSPAN12O95859 305 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 KRT14P02533 472 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 FHP07954 510 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 SP1P08047 785 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 ABOP16442 354 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 ZNF24P17028 368 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 MAGEA3P43357 314 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 CYB561P49447 251 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 CCR8P51685 355 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 EFNA3P52797 238 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 OR4D2P58180 307 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 RGS1Q08116 209 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 C3AR1Q16581 482 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 SLC25A25Q6KCM7 469 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 ZNF549Q6P9A3 640 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 KIAA0408Q6ZU52 694 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 ABHD13Q7L211 337 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 PIWIL4Q7Z3Z4 852 aaKnown RBP9.05□□□□□ -0.96
LRTM1-201ENST00000273286 SLC26A11Q86WA9 606 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 LRRC8AQ8IWT6 810 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 CPNE9Q8IYJ1 553 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 MFSD9Q8NBP5 474 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 ABHD11Q8NFV4 315 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 TBC1D20Q96BZ9 403 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 SERPINB12Q96P63 405 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 VKORC1Q9BQB6 163 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 NAT9Q9BTE0 207 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 TRIM8Q9BZR9 551 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 TRIM45Q9H8W5 580 aaPredicted RBP9.05□□□□□ -0.96
LRTM1-201ENST00000273286 KLHL1Q9NR64 748 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 LRFN1Q9P244 771 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 TINAGQ9UJW2 476 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 PDE10AQ9Y233 779 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 MEMO1Q9Y316 297 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 NAALAD2Q9Y3Q0 740 aa9.05□□□□□ -0.96
LRTM1-201ENST00000273286 CACNA1CQ13936 2221 aa9.04□□□□□ -0.96
LRTM1-201ENST00000273286 TRBC2A0A5B9 178 aa9.04□□□□□ -0.96
LRTM1-201ENST00000273286 FAM227AF5H4B4 570 aa9.04□□□□□ -0.96
LRTM1-201ENST00000273286 NDC80O14777 642 aa9.04□□□□□ -0.96
LRTM1-201ENST00000273286 NDUFS4O43181 175 aa9.04□□□□□ -0.96
LRTM1-201ENST00000273286 GALR3O60755 368 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms