RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 SLC35F1Q5T1Q4 408 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 PDSS1Q5T2R2 415 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 GAL3ST1Q99999 423 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 STARD5Q9NSY2 213 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 C14orf105Q9NVL8 296 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 AKAP8O43823 692 aaKnown RBP13.1□□□□□ -0.31
NPC1-201ENST00000269228 RPS17P08708 135 aaKnown RBP13.1□□□□□ -0.31
NPC1-201ENST00000269228 SLC6A9P48067 706 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 ALDH3A2P51648 485 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 ZNF846Q147U1 533 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 KIR2DS3Q14952 304 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 MAPK14Q16539 360 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 KIAA0895LQ68EN5 471 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 ZC3H14Q6PJT7 736 aaKnown RBP13.1□□□□□ -0.31
NPC1-201ENST00000269228 ZNF676Q8N7Q3 588 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 SPATA9Q9BWV2 254 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 KAT8Q9H7Z6 458 aaKnown RBP13.1□□□□□ -0.31
NPC1-201ENST00000269228 CPNE7Q9UBL6 633 aa13.1□□□□□ -0.31
NPC1-201ENST00000269228 PPP6CO00743 305 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 ETFAP13804 333 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.09□□□□□ -0.31
NPC1-201ENST00000269228 KLHL36Q8N4N3 616 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 ZNF480Q8WV37 535 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 ADAD1Q96M93 576 aaKnown RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 TIMM29Q9BSF4 260 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 A0A0J9YY10 115 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 ZNF99A8MXY4 864 aaPredicted RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 HTR1EP28566 365 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 CEACAM7Q14002 265 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 QPRTQ15274 297 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 DNM1P34Q6PK57 102 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 DCP2Q8IU60 420 aaKnown RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 OR56A3Q8NH54 315 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 OR52P1PQ8NH57 321 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 KCNN1Q92952 543 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 HSPBAP1Q96EW2 488 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 C11orf24Q96F05 449 aaPredicted RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 DHRS4Q9BTZ2 278 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 DOHHQ9BU89 302 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 SLC6A17Q9H1V8 727 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 NLGN3Q9NZ94 848 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 CLEC4EQ9ULY5 219 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 A0A075B6Q4 140 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 MROH6A6NGR9 719 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 SLC9B1P1A6NJY1 282 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 ANXA2P2A6NMY6 339 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 PSMD9O00233 223 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 UGDHO60701 494 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 SNX4O95219 450 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 EGFP01133 1207 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 ANXA2P07355 339 aaKnown RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 DHRS4L1P0CG22 281 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 PVRP15151 417 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 OTX2P32243 289 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 SDC2P34741 201 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 GBX2P52951 348 aaPredicted RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 ZXDBP98169 803 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 ACY1Q03154 408 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 CAMK1Q14012 370 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 PON3Q15166 354 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 TBC1D25Q3MII6 688 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 OGFOD2Q6N063 350 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 RABEPKQ7Z6M1 372 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 LMNTD1Q8N9Z9 388 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 TCF7L1Q9HCS4 588 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 OBP2AQ9NY56 170 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 RREB1Q92766 1687 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 UBE2QL1A1L167 161 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 RPP14O95059 124 aaKnown RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 PENKP01210 267 aaPredicted RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 ZNF888P0CJ79 500 aaPredicted RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 F3P13726 295 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 CSNK1EP49674 416 aaKnown RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 FAR1Q8WVX9 515 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 ASB11Q8WXH4 323 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 NR4A3Q92570 626 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 NXPE3Q969Y0 559 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 HIST1H2AAQ96QV6 131 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 LPAR4Q99677 370 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 BCAT2O15382 392 aaPredicted RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 PLOD3O60568 738 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 FGF4P08620 206 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 PSMB5P28074 263 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 ARSFP54793 590 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 MC1RQ01726 317 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 ZNF77Q15935 545 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 CDKN3Q16667 212 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 UBE2J2Q8N2K1 259 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 MINDY1Q8N5J2 469 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 TMEM234Q8WY98 164 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 SORBS1Q9BX66 1292 aaKnown RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 GRHPRQ9UBQ7 328 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 WBP11Q9Y2W2 641 aaKnown RBP13.09□□□□□ -0.31
NPC1-201ENST00000269228 NME7Q9Y5B8 376 aa13.09□□□□□ -0.31
NPC1-201ENST00000269228 A0A0A6YYC8 382 aaPredicted RBP13.08□□□□□ -0.32
NPC1-201ENST00000269228 I3L1I5 382 aaPredicted RBP13.08□□□□□ -0.32
NPC1-201ENST00000269228 GFRA2O00451 464 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 C1orf105O95561 183 aa13.08□□□□□ -0.32
NPC1-201ENST00000269228 LDOC1O95751 146 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms