RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 CROCCQ5TZA2 2017 aa9.03□□□□□ -0.96
VPS41-201ENST00000265745 ABCA12Q86UK0 2595 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 A0A1B0GTH9 108 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 ENO4A6NNW6 628 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 A8MVJ9 347 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 C17orf105B2RV13 164 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 J3QL48 77 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 WWP2O00308 870 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 SAP18O00422 153 aaKnown RBP9.02□□□□□ -0.97
VPS41-201ENST00000265745 TFECO14948 347 aaPredicted RBP9.02□□□□□ -0.97
VPS41-201ENST00000265745 HS6ST1O60243 411 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 KLK8O60259 260 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 OR6B1O95007 311 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 KLHL2O95198 593 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 ETHE1O95571 254 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 ALDOAP04075 364 aaKnown RBP9.02□□□□□ -0.97
VPS41-201ENST00000265745 TUBB4AP04350 444 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 PCSK2P16519 638 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 TNNI3P19429 210 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 CPN2P22792 545 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 TNFRSF8P28908 595 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 PTGS2P35354 604 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 SSR2P43308 183 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 HK2P52789 917 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 ALDH18A1P54886 795 aaKnown RBP9.02□□□□□ -0.97
VPS41-201ENST00000265745 RNF4P78317 190 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 IGLV3-21P80748 117 aaPredicted RBP9.02□□□□□ -0.97
VPS41-201ENST00000265745 IRF9Q00978 393 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 ID2Q02363 134 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 SLAMF1Q13291 335 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 SETDB1Q15047 1291 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 PCBP2Q15366 365 aaKnown RBP eCLIP9.02□□□□□ -0.973e-8■■■■■ 34.3
VPS41-201ENST00000265745 PFKFB4Q16877 469 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 CMPK2Q5EBM0 449 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 LIPJQ5W064 366 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 GRHL2Q6ISB3 625 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 IL20RBQ6UXL0 311 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 C3P1Q6ZMU1 363 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 NCCRP1Q6ZVX7 275 aaPredicted RBP9.02□□□□□ -0.97
VPS41-201ENST00000265745 RELL1Q8IUW5 271 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 OR4N5Q8IXE1 308 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 RNF175Q8N4F7 328 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 PSD4Q8NDX1 1056 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 C7orf57Q8NEG2 295 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 SLC2A12Q8TD20 617 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 ZNF721Q8TF20 911 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 PHF10Q8WUB8 498 aaKnown RBP9.02□□□□□ -0.97
VPS41-201ENST00000265745 ASB15Q8WXK1 588 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 TANKQ92844 425 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 RGMAQ96B86 450 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 SENP5Q96HI0 755 aaPredicted RBP9.02□□□□□ -0.97
VPS41-201ENST00000265745 RASL10BQ96S79 203 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 DMRTA2Q96SC8 542 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 MTERF1Q99551 399 aaKnown RBP9.02□□□□□ -0.97
VPS41-201ENST00000265745 SORBS1Q9BX66 1292 aaKnown RBP9.02□□□□□ -0.97
VPS41-201ENST00000265745 SNX15Q9NRS6 342 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 HPF1Q9NWY4 346 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 MS4A12Q9NXJ0 267 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 SPACA6W5XKT8 324 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 SCN2AQ99250 2005 aa9.02□□□□□ -0.97
VPS41-201ENST00000265745 A0A096LPK6 155 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 PINLYPA6NC86 204 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 LRRC14BA6NHZ5 514 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 WASHC1A8K0Z3 465 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 H0YIV9 168 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 PLPP1O14494 284 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 FGF17O60258 216 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 UGDHO60701 494 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 ZNF354AO60765 605 aaPredicted RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 PDE9AO76083 593 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 CLDN14O95500 239 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 IGKV3-11P04433 115 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 GFAPP14136 432 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 PTX3P26022 381 aaPredicted RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 TYK2P29597 1187 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 PTGER4P35408 488 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 SOX3P41225 446 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 STT3AP46977 705 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 NR0B1P51843 470 aaKnown RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 ARFIP1P53367 373 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 CKAP4Q07065 602 aaKnown RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 BIKQ13323 160 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 MPEG1Q2M385 716 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 ZNF750Q32MQ0 723 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 PIGGQ5H8A4 983 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 UBAP2Q5T6F2 1119 aaKnown RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 C8orf74Q6P047 294 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 METTL2BQ6P1Q9 378 aaKnown RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 ARHGAP11AQ6P4F7 1023 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 GPR180Q86V85 440 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 MYLK4Q86YV6 388 aaPredicted RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 ZCCHC7Q8N3Z6 543 aaKnown RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 L3MBTL4Q8NA19 623 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 OR2M7Q8NG81 312 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 OR52N2Q8NGI0 321 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 OR5L2Q8NGL0 311 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 FAM57AQ8TBR7 257 aa9.01□□□□□ -0.97
VPS41-201ENST00000265745 PPWD1Q96BP3 646 aaKnown RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 RBM18Q96H35 190 aaKnown RBP9.01□□□□□ -0.97
VPS41-201ENST00000265745 SCYL1Q96KG9 808 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms