RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 SLC29A1Q99808 456 aa8.84□□□□□ -0.99
SSR3-201ENST00000265044 ADI1Q9BV57 179 aa8.84□□□□□ -0.99
SSR3-201ENST00000265044 RAB26Q9ULW5 256 aa8.84□□□□□ -0.99
SSR3-201ENST00000265044 NAALAD2Q9Y3Q0 740 aa8.84□□□□□ -0.99
SSR3-201ENST00000265044 LOC105369274A0A096LPK9 316 aa8.83□□□□□ -1
SSR3-201ENST00000265044 LOC102723532A0A0G2JNH3 316 aa8.83□□□□□ -1
SSR3-201ENST00000265044 A0A1W2PPV9 198 aa8.83□□□□□ -1
SSR3-201ENST00000265044 OR5K3A6NET4 321 aa8.83□□□□□ -1
SSR3-201ENST00000265044 A8MUA0 341 aa8.83□□□□□ -1
SSR3-201ENST00000265044 H3BN98 237 aa8.83□□□□□ -1
SSR3-201ENST00000265044 PGRMC2O15173 223 aa8.83□□□□□ -1
SSR3-201ENST00000265044 DUX1O43812 170 aa8.83□□□□□ -1
SSR3-201ENST00000265044 AIFM1O95831 613 aa8.83□□□□□ -1
SSR3-201ENST00000265044 BCKDHBP21953 392 aa8.83□□□□□ -1
SSR3-201ENST00000265044 KHKP50053 298 aa8.83□□□□□ -1
SSR3-201ENST00000265044 GAB1Q13480 694 aa8.83□□□□□ -1
SSR3-201ENST00000265044 OGFRL1Q5TC84 451 aaPredicted RBP8.83□□□□□ -1
SSR3-201ENST00000265044 TTC23Q5W5X9 447 aa8.83□□□□□ -1
SSR3-201ENST00000265044 OR2T5Q6IEZ7 315 aa8.83□□□□□ -1
SSR3-201ENST00000265044 TTLL10Q6ZVT0 673 aa8.83□□□□□ -1
SSR3-201ENST00000265044 HIPK1Q86Z02 1210 aa8.83□□□□□ -1
SSR3-201ENST00000265044 MCATQ8IVS2 390 aaKnown RBP8.83□□□□□ -1
SSR3-201ENST00000265044 OR4N4Q8N0Y3 316 aa8.83□□□□□ -1
SSR3-201ENST00000265044 PJA1Q8NG27 643 aa8.83□□□□□ -1
SSR3-201ENST00000265044 OR2T29Q8NH02 315 aa8.83□□□□□ -1
SSR3-201ENST00000265044 PEX11GQ96HA9 241 aa8.83□□□□□ -1
SSR3-201ENST00000265044 YIPF3Q9GZM5 350 aa8.83□□□□□ -1
SSR3-201ENST00000265044 SOX17Q9H6I2 414 aaPredicted RBP8.83□□□□□ -1
SSR3-201ENST00000265044 SMURF2Q9HAU4 748 aa8.83□□□□□ -1
SSR3-201ENST00000265044 FANCEQ9HB96 536 aa8.83□□□□□ -1
SSR3-201ENST00000265044 KRT84Q9NSB2 600 aa8.83□□□□□ -1
SSR3-201ENST00000265044 ARMC1Q9NVT9 282 aa8.83□□□□□ -1
SSR3-201ENST00000265044 MYRFQ9Y2G1 1151 aa8.83□□□□□ -1
SSR3-201ENST00000265044 MAU2Q9Y6X3 613 aa8.83□□□□□ -1
SSR3-201ENST00000265044 ASCC3Q8N3C0 2202 aaKnown RBP8.83□□□□□ -1
SSR3-201ENST00000265044 OR10H3O60404 316 aa8.83□□□□□ -1
SSR3-201ENST00000265044 OR2B3O76000 313 aa8.83□□□□□ -1
SSR3-201ENST00000265044 LYNP07948 512 aa8.83□□□□□ -1
SSR3-201ENST00000265044 THRBP10828 461 aa8.83□□□□□ -1
SSR3-201ENST00000265044 MYF5P13349 255 aa8.83□□□□□ -1
SSR3-201ENST00000265044 ST6GAL1P15907 406 aa8.83□□□□□ -1
SSR3-201ENST00000265044 GSTM2P28161 218 aa8.83□□□□□ -1
SSR3-201ENST00000265044 BSGP35613 385 aa8.83□□□□□ -1
SSR3-201ENST00000265044 CDK9P50750 372 aaKnown RBP8.83□□□□□ -1
SSR3-201ENST00000265044 ZNF155Q12901 538 aaPredicted RBP8.83□□□□□ -1
SSR3-201ENST00000265044 BNIP3Q12983 259 aa8.83□□□□□ -1
SSR3-201ENST00000265044 PRPF38BQ5VTL8 546 aaKnown RBP8.83□□□□□ -1
SSR3-201ENST00000265044 SERPINA11Q86U17 422 aa8.83□□□□□ -1
SSR3-201ENST00000265044 AMER3Q8N944 861 aa8.83□□□□□ -1
SSR3-201ENST00000265044 NUP43Q8NFH3 380 aa8.83□□□□□ -1
SSR3-201ENST00000265044 OR5D16Q8NGK9 328 aa8.83□□□□□ -1
SSR3-201ENST00000265044 OR9A2Q8NGT5 310 aa8.83□□□□□ -1
SSR3-201ENST00000265044 OR9A4Q8NGU2 314 aa8.83□□□□□ -1
SSR3-201ENST00000265044 GPBAR1Q8TDU6 330 aa8.83□□□□□ -1
SSR3-201ENST00000265044 TEFMQ96QE5 360 aaKnown RBP8.83□□□□□ -1
SSR3-201ENST00000265044 NR1H4Q96RI1 486 aaPredicted RBP8.83□□□□□ -1
SSR3-201ENST00000265044 CHRDQ9H2X0 955 aa8.83□□□□□ -1
SSR3-201ENST00000265044 OR51I1Q9H343 314 aa8.83□□□□□ -1
SSR3-201ENST00000265044 DNAAF2Q9NVR5 837 aaKnown RBP8.83□□□□□ -1
SSR3-201ENST00000265044 PDP2Q9P2J9 529 aa8.83□□□□□ -1
SSR3-201ENST00000265044 KLF15Q9UIH9 416 aa8.83□□□□□ -1
SSR3-201ENST00000265044 RIMS3Q9UJD0 308 aa8.83□□□□□ -1
SSR3-201ENST00000265044 MAN2B2Q9Y2E5 1009 aa8.83□□□□□ -1
SSR3-201ENST00000265044 KIF26AQ9ULI4 1882 aaPredicted RBP8.83□□□□□ -1
SSR3-201ENST00000265044 TICRRQ7Z2Z1 1910 aa8.83□□□□□ -1
SSR3-201ENST00000265044 SOCS2O14508 198 aa8.83□□□□□ -1
SSR3-201ENST00000265044 MC3RP41968 323 aa8.83□□□□□ -1
SSR3-201ENST00000265044 SRSF5Q13243 272 aaKnown RBP8.83□□□□□ -1
SSR3-201ENST00000265044 GPR68Q15743 365 aa8.83□□□□□ -1
SSR3-201ENST00000265044 COX20Q5RI15 118 aa8.83□□□□□ -1
SSR3-201ENST00000265044 SWT1Q5T5J6 900 aaKnown RBP8.83□□□□□ -1
SSR3-201ENST00000265044 HLA-DQA1Q5Y7H0 255 aa8.83□□□□□ -1
SSR3-201ENST00000265044 C8orf59Q8N0T1 100 aaPredicted RBP8.83□□□□□ -1
SSR3-201ENST00000265044 LRRC25Q8N386 305 aaPredicted RBP8.83□□□□□ -1
SSR3-201ENST00000265044 COX18Q8N8Q8 333 aa8.83□□□□□ -1
SSR3-201ENST00000265044 ZFP90Q8TF47 636 aa8.83□□□□□ -1
SSR3-201ENST00000265044 WDR34Q96EX3 536 aa8.83□□□□□ -1
SSR3-201ENST00000265044 RBM4BQ9BQ04 359 aaKnown RBP8.83□□□□□ -1
SSR3-201ENST00000265044 NDC1Q9BTX1 674 aa8.83□□□□□ -1
SSR3-201ENST00000265044 RBM4Q9BWF3 364 aaKnown RBP8.83□□□□□ -1
SSR3-201ENST00000265044 CXorf36Q9H7Y0 433 aa8.83□□□□□ -1
SSR3-201ENST00000265044 NT5DC2Q9H857 520 aa8.83□□□□□ -1
SSR3-201ENST00000265044 DCAF13Q9NV06 445 aaKnown RBP8.83□□□□□ -1
SSR3-201ENST00000265044 BLOC1S6Q9UL45 172 aa8.83□□□□□ -1
SSR3-201ENST00000265044 ST14Q9Y5Y6 855 aa8.83□□□□□ -1
SSR3-201ENST00000265044 SPTBN2O15020 2390 aa8.83□□□□□ -1
SSR3-201ENST00000265044 HEATR5BQ9P2D3 2071 aa8.83□□□□□ -1
SSR3-201ENST00000265044 SCN2AQ99250 2005 aa8.83□□□□□ -1
SSR3-201ENST00000265044 KIF1CO43896 1103 aaKnown RBP8.82□□□□□ -1
SSR3-201ENST00000265044 KCNK5O95279 499 aa8.82□□□□□ -1
SSR3-201ENST00000265044 ACPPP15309 386 aa8.82□□□□□ -1
SSR3-201ENST00000265044 IL7RP16871 459 aa8.82□□□□□ -1
SSR3-201ENST00000265044 IGFBP5P24593 272 aa8.82□□□□□ -1
SSR3-201ENST00000265044 MERTKQ12866 999 aa8.82□□□□□ -1
SSR3-201ENST00000265044 LRIF1Q5T3J3 769 aa8.82□□□□□ -1
SSR3-201ENST00000265044 PHF19Q5T6S3 580 aa8.82□□□□□ -1
SSR3-201ENST00000265044 OR52E8Q6IFG1 317 aa8.82□□□□□ -1
SSR3-201ENST00000265044 FRMPD2BQ6IN97 320 aa8.82□□□□□ -1
SSR3-201ENST00000265044 RNF165Q6ZSG1 346 aa8.82□□□□□ -1
SSR3-201ENST00000265044 WDR53Q7Z5U6 358 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms