RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MYH7BA7E2Y1 1941 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 ZNF670-ZNF695F2Z2N8 137 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 J3QRK9 145 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 PPP6CO00743 305 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 UGDHO60701 494 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 CDRT1O95170 752 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 RAB36O95755 333 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 INHBCP55103 352 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 TSPAN5P62079 268 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 FAM189BP81408 668 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 RASGEF1BQ0VAM2 473 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 SMCO1Q147U7 214 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 METTL2BQ6P1Q9 378 aaKnown RBP13.38□□□□□ -0.27
CDH3-201ENST00000264012 VTCN1Q7Z7D3 282 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 HCAR2Q8TDS4 363 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 NT5C3BQ969T7 300 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 MAGIXQ9H6Y5 334 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 SEC61A2Q9H9S3 476 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 PCDHB14Q9Y5E9 798 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 A0A1W2PRQ8 180 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 ENTPD6O75354 484 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 HK1P19367 917 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 HOXD9P28356 352 aaPredicted RBP13.38□□□□□ -0.27
CDH3-201ENST00000264012 HLA-FP30511 346 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 CSNK1DP48730 415 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 ADAM8P78325 824 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 NNATQ16517 81 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 MOGQ16653 247 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 SLC36A3Q495N2 470 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 XKR5Q6UX68 686 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 PARS2Q7L3T8 475 aaKnown RBP13.38□□□□□ -0.27
CDH3-201ENST00000264012 ZSWIM9Q86XI8 627 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 GALNT12Q8IXK2 581 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 ZBTB8BQ8NAP8 495 aaPredicted RBP13.38□□□□□ -0.27
CDH3-201ENST00000264012 C1orf216Q8TAB5 229 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 FGF13Q92913 245 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 CDCA3Q99618 268 aaPredicted RBP13.38□□□□□ -0.27
CDH3-201ENST00000264012 ZNF879B4DU55 563 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 CSTAP01040 98 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 DBIP07108 87 aaKnown RBP13.38□□□□□ -0.27
CDH3-201ENST00000264012 RHCEP18577 417 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 HOXC12P31275 282 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 MLLT10P55197 1068 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 OR4N5Q8IXE1 308 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 OR52N2Q8NGI0 321 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 FANK1Q8TC84 345 aa13.38□□□□□ -0.27
CDH3-201ENST00000264012 H0YJX3 145 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 SOCS2O14508 198 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 LILRB3O75022 631 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 SLC2A2P11168 524 aaPredicted RBP13.37□□□□□ -0.27
CDH3-201ENST00000264012 CBLBQ13191 982 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 MAPK14Q16539 360 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 ZNF404Q494X3 552 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 CHERPQ8IWX8 916 aaKnown RBP13.37□□□□□ -0.27
CDH3-201ENST00000264012 GATSQ8NAP1 163 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 OR52P1PQ8NH57 321 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 ZNF420Q8TAQ5 688 aaPredicted RBP13.37□□□□□ -0.27
CDH3-201ENST00000264012 TM9SF2Q99805 663 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 G6PC3Q9BUM1 346 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 GRHPRQ9UBQ7 328 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 LHX3Q9UBR4 397 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 A0A1B0GUL6 1792 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 ANHXE9PGG2 379 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 VILLO15195 856 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 TIMP2P16035 220 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 ZNF20P17024 532 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 CD72P21854 359 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 TAS2R38P59533 333 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 SIM1P81133 766 aaPredicted RBP13.37□□□□□ -0.27
CDH3-201ENST00000264012 NPRL3Q12980 569 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 CTC1Q2NKJ3 1217 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 KCTD11Q693B1 232 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 FIGLAQ6QHK4 219 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 GALNTL5Q7Z4T8 443 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 DOK4Q8TEW6 326 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 THEM6Q8WUY1 208 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 KHSRPQ92945 711 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDH3-201ENST00000264012 ATOH8Q96SQ7 321 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 KCNK12Q9HB15 430 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 IFT46Q9NQC8 304 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 SMOXQ9NWM0 555 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 PRAMEF33A0A0G2JMD5 474 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 PRAMEF10O60809 474 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 CLPXO76031 633 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 PORP16435 677 aaPredicted RBP13.37□□□□□ -0.27
CDH3-201ENST00000264012 IL1RNP18510 177 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 VBP1P61758 197 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 OR51G2Q8NGK0 314 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 MAL2Q969L2 176 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 DTD2Q96FN9 168 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 BARD1Q99728 777 aaKnown RBP13.37□□□□□ -0.27
CDH3-201ENST00000264012 HCFC2Q9Y5Z7 792 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 PRSS21Q9Y6M0 314 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 PROM1O43490 865 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 APBB3O95704 486 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 HEXBP07686 556 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 GSTT2BP0CG30 244 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 PSKH1P11801 424 aa13.37□□□□□ -0.27
CDH3-201ENST00000264012 HOXD8P13378 290 aaPredicted RBP13.37□□□□□ -0.27
CDH3-201ENST00000264012 CCR7P32248 378 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms