RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ARL1P40616 181 aaPredicted RBP14.93□□□□□ -0.02
USE1-201ENST00000263897 STT3AP46977 705 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 RNF4P78317 190 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 TNFRSF17Q02223 184 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 TRAF3Q13114 568 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 FAM153CQ494X1 144 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 MILR1Q7Z6M3 343 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 GPALPP1Q8IXQ4 340 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 POGLUT1Q8NBL1 392 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 OR5L2Q8NGL0 311 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 ZNF721Q8TF20 911 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 PPWD1Q96BP3 646 aaKnown RBP14.93□□□□□ -0.02
USE1-201ENST00000263897 TRIM44Q96DX7 344 aaPredicted RBP14.93□□□□□ -0.02
USE1-201ENST00000263897 MTBPQ96DY7 904 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 SENP5Q96HI0 755 aaPredicted RBP14.93□□□□□ -0.02
USE1-201ENST00000263897 DGAT2Q96PD7 388 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 SERPINI1Q99574 410 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 RHOXF2Q9BQY4 288 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 SEMA4BQ9NPR2 832 aaPredicted RBP14.93□□□□□ -0.02
USE1-201ENST00000263897 LYARQ9NX58 379 aaKnown RBP14.93□□□□□ -0.02
USE1-201ENST00000263897 ITPR2Q14571 2701 aa14.93□□□□□ -0.02
USE1-201ENST00000263897 A0A1W2PR48 441 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 WASHC1A8K0Z3 465 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 A8MVJ9 347 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 WWP2O00308 870 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 SEMA3DO95025 777 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 GPR75O95800 540 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 RPS17P08708 135 aaKnown RBP14.92□□□□□ -0.02
USE1-201ENST00000263897 ZNF24P17028 368 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 BUD31P41223 144 aaPredicted RBP14.92□□□□□ -0.02
USE1-201ENST00000263897 MEOX1P50221 254 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 HK2P52789 917 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 CASP6P55212 293 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 FOLH1Q04609 750 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 SLC29A2Q14542 456 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 C10orf62Q5T681 223 aaPredicted RBP14.92□□□□□ -0.02
USE1-201ENST00000263897 FRG2Q64ET8 278 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 TTC19Q6DKK2 380 aaPredicted RBP14.92□□□□□ -0.02
USE1-201ENST00000263897 CYP20A1Q6UW02 462 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 IL20RBQ6UXL0 311 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 Q6ZPB1 254 aaPredicted RBP14.92□□□□□ -0.02
USE1-201ENST00000263897 RPS27LQ71UM5 84 aaKnown RBP14.92□□□□□ -0.02
USE1-201ENST00000263897 SPPL2CQ8IUH8 684 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 SREK1Q8WXA9 508 aaKnown RBP14.92□□□□□ -0.02
USE1-201ENST00000263897 ASB15Q8WXK1 588 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 FRG2BQ96QU4 278 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 RASL10BQ96S79 203 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 C1QTNF3Q9BXJ4 246 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 TXLNGYQ9BZA5 131 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 TIMMDC1Q9NPL8 285 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 HPF1Q9NWY4 346 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 COPS7AQ9UBW8 275 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 ERVK-11Q9UQG0 969 aa14.92□□□□□ -0.02
USE1-201ENST00000263897 EML6Q6ZMW3 1958 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 A8MT66 165 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 PPP6CO00743 305 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 PRKRAO75569 313 aaKnown RBP14.91□□□□□ -0.02
USE1-201ENST00000263897 OR6B1O95007 311 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 IGKV3-11P04433 115 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 ALOX15P16050 662 aaPredicted RBP14.91□□□□□ -0.02
USE1-201ENST00000263897 SOX3P41225 446 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 C3AR1Q16581 482 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 GGTA1PQ4G0N0 100 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 TEX35Q5T0J7 233 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 MTFR2Q6P444 385 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 DGAT2L6Q6ZPD8 337 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 NUDT13Q86X67 352 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 ST13P4Q8IZP2 240 aaPredicted RBP14.91□□□□□ -0.02
USE1-201ENST00000263897 GHDCQ8N2G8 530 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 ZFP62Q8NB50 900 aaPredicted RBP14.91□□□□□ -0.02
USE1-201ENST00000263897 MYRIPQ8NFW9 859 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 OR4F6Q8NGB9 312 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 C16orf52Q8NHV5 167 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 ZNF483Q8TF39 744 aaPredicted RBP14.91□□□□□ -0.02
USE1-201ENST00000263897 MAGED4Q96JG8 741 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 WDR41Q9HAD4 459 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 AHSPQ9NZD4 102 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 TMEM216Q9P0N5 145 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 SUCOQ9UBS9 1254 aaKnown RBP14.91□□□□□ -0.02
USE1-201ENST00000263897 FETUBQ9UGM5 382 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 SH3BGRL2Q9UJC5 107 aa14.91□□□□□ -0.02
USE1-201ENST00000263897 TEX15Q9BXT5 2789 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 A0A1B0GTL3 188 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 GLOD5A6NK44 160 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 DYRK3O43781 588 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 OTCP00480 354 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 GBAP04062 536 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 NR2F6P10588 404 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 TAC1P20366 129 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 HSD17B3P37058 310 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 DCTP40126 519 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 CDH13P55290 713 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 PLIN5Q00G26 463 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 IFT88Q13099 833 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 MPEG1Q2M385 716 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 ZNF750Q32MQ0 723 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 SGO1Q5FBB7 561 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 PIGGQ5H8A4 983 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 ZNF787Q6DD87 383 aa14.9□□□□□ -0.02
USE1-201ENST00000263897 BNC2Q6ZN30 1099 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms