RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 TACR1P25103 407 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 HK2P52789 917 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 KIAA0040Q15053 153 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 NDUFAF5Q5TEU4 345 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 FAM180BQ6P0A1 224 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 QSOX2Q6ZRP7 698 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 ANKRD37Q7Z713 158 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 SCUBE1Q8IWY4 988 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 FITM2Q8N6M3 262 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 ADAMTS18Q8TE60 1221 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 METTL21AQ8WXB1 218 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 TUBGCP3Q96CW5 907 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 RPF2Q9H7B2 306 aaKnown RBP17.21■□□□□ 0.35
SDF4-201ENST00000263741 PRDM9Q9NQV7 894 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 POLHQ9Y253 713 aa17.21■□□□□ 0.35
SDF4-201ENST00000263741 MRPS33Q9Y291 106 aaKnown RBP17.21■□□□□ 0.35
SDF4-201ENST00000263741 SEC24DO94855 1032 aaPredicted RBP17.2■□□□□ 0.34
SDF4-201ENST00000263741 IL3P08700 152 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 COX6A1P12074 109 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 PRPH2P23942 346 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 BUD31P41223 144 aaPredicted RBP17.2■□□□□ 0.34
SDF4-201ENST00000263741 ALDH9A1P49189 494 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 TAS2R50P59544 299 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 KCNJ2P63252 427 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 CGB2Q6NT52 195 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 NOXRED1Q6NXP6 359 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 MAVSQ7Z434 540 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 CLHC1Q8NHS4 586 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 EXTL1Q92935 676 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 TM4SF18Q96CE8 201 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 TRIM55Q9BYV6 548 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 IGKV3D-11A0A0A0MRZ8 115 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 A8MUA0 341 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 PGRMC2O15173 223 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 SNUPNO95149 360 aaKnown RBP17.2■□□□□ 0.34
SDF4-201ENST00000263741 UNC5CO95185 931 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 CELA2AP08217 269 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 TMEM205Q6UW68 189 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 WDR75Q8IWA0 830 aaKnown RBP17.2■□□□□ 0.34
SDF4-201ENST00000263741 ZNF595Q8IYB9 648 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 C16orf78Q8WTQ4 265 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 RSRC1Q96IZ7 334 aaKnown RBP17.2■□□□□ 0.34
SDF4-201ENST00000263741 NOP53Q9NZM5 478 aaKnown RBP17.2■□□□□ 0.34
SDF4-201ENST00000263741 HEY2Q9UBP5 337 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 ATRXP46100 2492 aa17.2■□□□□ 0.34
SDF4-201ENST00000263741 PEX12O00623 359 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 CLDN4O14493 209 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 FOLH1Q04609 750 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 CRTC2Q53ET0 693 aaPredicted RBP17.19■□□□□ 0.34
SDF4-201ENST00000263741 SFT2D3Q587I9 215 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 GALNT18Q6P9A2 607 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 ASRGL1Q7L266 308 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 PLPP5Q8NEB5 264 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 DOK4Q8TEW6 326 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 SNRNP27Q8WVK2 155 aaKnown RBP17.19■□□□□ 0.34
SDF4-201ENST00000263741 ANKRD9Q96BM1 317 aaPredicted RBP17.19■□□□□ 0.34
SDF4-201ENST00000263741 EGLN2Q96KS0 407 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 ZNF160Q9HCG1 818 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 MS4A12Q9NXJ0 267 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 MMACHCQ9Y4U1 282 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 GOLGA8QA0A0J9YX86 632 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 GOLGA8OA6NCC3 632 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 GOLGA8NF8WBI6 632 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 IGHEP01854 428 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 SDC1P18827 310 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 PTGER1P34995 402 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 HSD17B7P56937 341 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 ZNF763Q0D2J5 394 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 PCOLCEQ15113 449 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 ATP6AP1LQ52LC2 224 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 C6orf136Q5SQH8 315 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 GPR155Q7Z3F1 870 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 CRLF3Q8IUI8 442 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 THAP4Q8WY91 577 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 GFM2Q969S9 779 aaKnown RBP17.19■□□□□ 0.34
SDF4-201ENST00000263741 THOC1Q96FV9 657 aaKnown RBP17.19■□□□□ 0.34
SDF4-201ENST00000263741 C7orf26Q96N11 449 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 LRRC37BQ96QE4 947 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 WDR77Q9BQA1 342 aaPredicted RBP17.19■□□□□ 0.34
SDF4-201ENST00000263741 WDR55Q9H6Y2 383 aaPredicted RBP17.19■□□□□ 0.34
SDF4-201ENST00000263741 RIC8BQ9NVN3 520 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 KCNMB2Q9Y691 235 aa17.19■□□□□ 0.34
SDF4-201ENST00000263741 IGHV1-45A0A0A0MS14 117 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 TCRBV16S1A1N1A0A5B0 115 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 NPIPB8E9PQR5 432 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 SDHDO14521 159 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 EDF1O60869 148 aaKnown RBP17.18■□□□□ 0.34
SDF4-201ENST00000263741 TLX1P31314 330 aaPredicted RBP17.18■□□□□ 0.34
SDF4-201ENST00000263741 RASSF2P50749 326 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 OR4D2P58180 307 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 RAPSNQ13702 412 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 ZNF750Q32MQ0 723 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 CPEB2Q7Z5Q1 589 aaKnown RBP17.18■□□□□ 0.34
SDF4-201ENST00000263741 FNDC5Q8NAU1 212 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 PIWIL2Q8TC59 973 aaKnown RBP17.18■□□□□ 0.34
SDF4-201ENST00000263741 PPP3R2Q96LZ3 170 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 TSSK3Q96PN8 268 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 AKTIPQ9H8T0 292 aa17.18■□□□□ 0.34
SDF4-201ENST00000263741 PNO1Q9NRX1 252 aaKnown RBP17.18■□□□□ 0.34
SDF4-201ENST00000263741 LOC102723996A0A087X1L8 192 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms