RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 GPRC5BQ9NZH0 403 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 GRHPRQ9UBQ7 328 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 ZFR2Q9UPR6 939 aaKnown RBP10.3□□□□□ -0.76
CD44-201ENST00000263398 SH3D21A4FU49 640 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 GABBR2O75899 941 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 SNAPC5O75971 98 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 SCGNO76038 276 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 PRSS56P0CW18 603 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 LAMP1P11279 417 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 ATF4P18848 351 aaPredicted RBP10.3□□□□□ -0.76
CD44-201ENST00000263398 HK3P52790 923 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 ACTC1P68032 377 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 ACTA1P68133 377 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 HYAL2Q12891 473 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 ZNF267Q14586 743 aaPredicted RBP10.3□□□□□ -0.76
CD44-201ENST00000263398 FLYWCH1Q4VC44 716 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 EOGTQ5NDL2 527 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 C6orf183Q5T699 404 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 METTL2BQ6P1Q9 378 aaKnown RBP10.3□□□□□ -0.76
CD44-201ENST00000263398 TLDC1Q6P9B6 456 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 LHFPL3Q86UP9 236 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 CLECL1Q8IZS7 167 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 DENND6BQ8NEG7 585 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 CD200R1Q8TD46 325 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 LRR1Q96L50 414 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 OR2M4Q96R27 311 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.3□□□□□ -0.76
CD44-201ENST00000263398 ABI3Q9P2A4 366 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 AKAP11Q9UKA4 1901 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 NPIPA5E9PKD4 350 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 SOX30O94993 753 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 APOL3O95236 402 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 IFNA21P01568 189 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 POLR2CP19387 275 aaPredicted RBP10.3□□□□□ -0.76
CD44-201ENST00000263398 SLC9A3P48764 834 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 SLAMF1Q13291 335 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 UGT3A2Q3SY77 523 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 ABCA11PQ4W5N1 156 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 LDLRAD1Q5T700 205 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 MANEALQ5VSG8 457 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 SLC9B2Q86UD5 537 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 CHERPQ8IWX8 916 aaKnown RBP10.3□□□□□ -0.76
CD44-201ENST00000263398 TMEM130Q8N3G9 435 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 ACBD7Q8N6N7 88 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 IL17FQ96PD4 163 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 BOCQ9BWV1 1114 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 ARNT2Q9HBZ2 717 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 LAMP5Q9UJQ1 280 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 SCP2D1Q9UJQ7 156 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 EMCNQ9ULC0 261 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 NPIPA1Q9UND3 350 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 ENPP4Q9Y6X5 453 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 UBR2Q8IWV8 1755 aa10.3□□□□□ -0.76
CD44-201ENST00000263398 MARF1Q9Y4F3 1742 aaKnown RBP10.3□□□□□ -0.76
CD44-201ENST00000263398 RPS17P08708 135 aaKnown RBP10.29□□□□□ -0.76
CD44-201ENST00000263398 GCAP28676 217 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 SLC6A9P48067 706 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 ITPRIPL2Q3MIP1 535 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 TMEM35AQ53FP2 167 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 PRRT3Q5FWE3 981 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 ZNF648Q5T619 568 aaPredicted RBP10.29□□□□□ -0.76
CD44-201ENST00000263398 TMED4Q7Z7H5 227 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 CBARPQ8N350 705 aaPredicted RBP10.29□□□□□ -0.76
CD44-201ENST00000263398 TEX26Q8N6G2 289 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 OR51A7Q8NH64 312 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 NRG4Q8WWG1 115 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 RBP7Q96R05 134 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 SGIP1Q9BQI5 828 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 MVB12BQ9H7P6 319 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 HRASLS2Q9NWW9 162 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 RDH8Q9NYR8 311 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 MYO5AQ9Y4I1 1855 aaKnown RBP10.29□□□□□ -0.76
CD44-201ENST00000263398 TOGARAM1Q9Y4F4 1720 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 SLC35F4A4IF30 521 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 ZNF701M0R085 212 aaPredicted RBP10.29□□□□□ -0.76
CD44-201ENST00000263398 SORBS2O94875 1100 aaKnown RBP10.29□□□□□ -0.76
CD44-201ENST00000263398 CCL5P13501 91 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 GPX3P22352 226 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 SUOXP51687 545 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 MLLT10P55197 1068 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 ASPGQ86U10 573 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 C12orf40Q86WS4 652 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 APCDD1Q8J025 514 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 Q8N402 240 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 OR13J1Q8NGT2 312 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 FIBINQ8TAL6 211 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 HCAR2Q8TDS4 363 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 HSPA12BQ96MM6 686 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 DPH7Q9BTV6 452 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 POLE4Q9NR33 117 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 C14orf119Q9NWQ9 140 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 PRODH2Q9UF12 536 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 ACSL6Q9UKU0 697 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 SARDHQ9UL12 918 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 A0A1B0GVT2 93 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 FBP2O00757 339 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 LCN1P31025 176 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 RPS21P63220 83 aaKnown RBP10.29□□□□□ -0.76
CD44-201ENST00000263398 PROX2Q3B8N5 592 aa10.29□□□□□ -0.76
CD44-201ENST00000263398 GTDC1Q4AE62 458 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms